Stenotrophomonas maltophilia K279a: Smlt3387
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Entry
Smlt3387 CDS
T00718
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sml
Stenotrophomonas maltophilia K279a
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sml03016
]
Smlt3387 (truB)
Enzymes [BR:
sml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Smlt3387 (truB)
Transfer RNA biogenesis [BR:
sml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Smlt3387 (truB)
Prokaryotic type
Smlt3387 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CAQ46815
UniProt:
B2FN88
LinkDB
All DBs
Position
complement(3425557..3426525)
Genome browser
AA seq
322 aa
AA seq
DB search
MSDADRAAAVEHGSTLQNSAMTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGG
HTGSLDPLATGLLPLCFGEATKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLQRPVP
AISAEALQAALAALTGNIRQRAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVL
EQQPERLRLRVTCGSGTYIRSLARDLGEALGCGAHISALRRLWVEPFREPVMVTLDQLRA
MVEAGDEAGMDALLLPLAAGLAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDD
AVQGLGQVDESGLLAPQRRFNL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcagaccgcgctgcggcagtcgagcatggctcgaccctacaaaattctgcc
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagttccaacgccgccctgcaggtagcccgccgcctgttccgcgccgagaaagggggg
cacaccggcagccttgacccgctggccaccggcctgctgccgctgtgcttcggcgaggca
accaagatcgccggcctgctgctcggctcggccaaggcctacgacgccgagatcgtgctg
ggccagaccaccgataccgacgatgccgaaggccaggtgctgctgcagcgcccggtgccg
gccatcagtgccgaagcgctgcaggccgcactggcggcgctgaccggcaacatccgccag
cgtgccccgatctattcggcgctgaagcagggcggtgagccgctgtatgtgaaggcccgc
cgcggcgatgtcatcgaagcgcccgaacgcgaggtgcaggtacacgccatcgaggtgctg
gagcagcagccggaacggttgcggctgcgcgtgacctgcggctccggcacctacatccgc
agcctggcccgcgacctgggcgaggcgctgggctgtggtgcccacatcagcgcactgcgt
cggctctgggtcgagccgttccgtgagccggtgatggtcaccctggaccagttgcgggcg
atggtcgaggcgggtgacgaggcgggcatggacgcgctgctgctgccgctggcggccggc
ctggccgagtacccgcgggtcgacctggatgccgaccaggcccaccgcttctgcgtcggc
cagcgccagcgcgatctgtcctggccgcgtggcctggtggcggtgtttggtccggacgac
gctgtccagggcctgggccaggtcgacgaaagcggcctgctggccccgcagcgtcgtttc
aacctctga
DBGET
integrated database retrieval system
