Stenotrophomonas maltophilia K279a: Smlt3549
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Entry
Smlt3549 CDS
T00718
Symbol
rnc
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smlt3549 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sml03019
]
Smlt3549 (rnc)
03009 Ribosome biogenesis [BR:
sml03009
]
Smlt3549 (rnc)
03036 Chromosome and associated proteins [BR:
sml03036
]
Smlt3549 (rnc)
Enzymes [BR:
sml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Smlt3549 (rnc)
Messenger RNA biogenesis [BR:
sml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Smlt3549 (rnc)
Ribosome biogenesis [BR:
sml03009
]
Eukaryotic type
90S particles
RNase
Smlt3549 (rnc)
Prokaryotic type
rRNA processing factors
Smlt3549 (rnc)
Chromosome and associated proteins [BR:
sml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Smlt3549 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CAQ46970
UniProt:
B2FPX9
LinkDB
All DBs
Position
complement(3598583..3599263)
Genome browser
AA seq
226 aa
AA seq
DB search
MPSKFIQRGDLIGHAFSDPALLKQALTHRSAGAPHNERLEFLGDSIVNMMAAEALYRRWP
KADEGAMTRARAELVREGALAVIARTLQLGERLTLGPGEMKSGGHRRDSILADAVEAVVA
AIYLDAGFEACRAVVLPWFSASIEALPASGRPEKDPKTRLQEWLQARQKALPQYELVSES
GDDHAKHFRVRCNVADPAASTEGEGASRRLAEQQAAAAVLEQLDSK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagtaaattcatccaacgtggcgacctgatcggtcatgccttcagcgacccggcc
ctgctcaagcaggcgctgacgcatcgcagtgccggtgcgccgcacaacgagcgcctggag
ttcctcggcgacagcatcgtcaacatgatggcggccgaggcgttgtaccgacgctggccc
aaggctgacgaaggggcgatgacccgtgcccgtgccgagctggtgcgcgaaggcgcgttg
gcggtgatcgcgcgcaccctgcagttgggcgagcggctgaccctgggtccgggcgaaatg
aagtccggcggtcatcgccgcgactcgatcctggccgacgcagtggaagccgtggtggcg
gcgatctacctggatgccggcttcgaggcctgccgggcggtggtactgccctggttcagc
gcttcgatcgaggcgctgccggcctccggccgtcccgagaaggaccccaagacccgcctg
caggaatggctgcaggcccgacagaaggcgttgccgcagtatgaactggtgtcagaatcc
ggtgacgaccatgccaagcacttccgggtacgctgcaacgtagccgacccggccgccagc
accgagggcgaaggcgcctcgcggcggcttgccgaacaacaggcggctgcggccgtccta
gaacaactggattccaagtga
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integrated database retrieval system