Stenotrophomonas maltophilia K279a: Smlt3841
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Entry
Smlt3841 CDS
T00718
Name
(GenBank) putative DNA-directed RNA polymerase
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Smlt3841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sml03021
]
Smlt3841
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt3841
Enzymes [BR:
sml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Smlt3841
Transcription machinery [BR:
sml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Smlt3841
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Smlt3841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAQ47247
UniProt:
B2FT05
LinkDB
All DBs
Position
complement(3933428..3933727)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQATLDNSETEDKPTVLALREIAARKI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcaccgtagaagattgcctggaagtcgttaacaaccgtttcgaactggtc
atgatggcttccaagcgtgcccgccagctcgccaacggcgtgcaggccacgctggacaac
agcgagaccgaggacaagccgaccgtgctggcgctgcgcgaaatcgccgcccgcaagatc
gacaacgcgctgatcgacgaagtcgagaaggccgagcgtgagcgcgccgagcgcgaagcg
ctggagtgggctgccgccgaagtggtcgccgacgaagacatgtccaagaacgacgattga
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