Stenotrophomonas maltophilia K279a: Smlt4184
Help
Entry
Smlt4184 CDS
T00718
Symbol
topA
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sml
Stenotrophomonas maltophilia K279a
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sml03032
]
Smlt4184 (topA)
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt4184 (topA)
Enzymes [BR:
sml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Smlt4184 (topA)
DNA replication proteins [BR:
sml03032
]
Prokaryotic type
DNA Topoisomerases
Smlt4184 (topA)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Smlt4184 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAQ47575
UniProt:
B2FIS0
LinkDB
All DBs
Position
4299407..4301899
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKN
EKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGLVKDKPMQRVVFTEITPR
AIKEAISQPRAIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAAECAHPSQHFNAKLIKLDGQKFEQFTITDGDTAEAARMRIQQ
AAQGTLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPAQVARFLTDDERRLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERIQAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEDWIPLMSRFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEEKPKFASLRPGQSMHTISLEDALELFLMPRALGEDNGE
PVSVGIGRFGPFAKRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFEGSDI
QVLNGRFGPYISDGRMNGKIPKDREPASLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAP
AKKAAVKKEAAPKKAAAKKAPAKKAAAKKAVKKAAAKKAPAKKAAKKAAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggactacaccgtcctggcctcgtatgggcatgtgcgtgacctgattccgaag
gaaggcgcggtcgacccagacaacgggttcgccatgcactacgacgtgatcgacaagaac
gagaagcacgtcgatgcgatcgccaaggccgccaagggcgccgacgacatcctgctggcg
accgacccggatcgcgagggtgaagcgatcagctggcatatcgccgagatcctgaaggaa
cgcgggctggtcaaggacaagcccatgcagcgcgtggtgttcaccgagatcaccccgcgc
gccatcaaggaagccatcagccagccgcgcgcgatcgccagcgacctggtcgatgcccag
caggcgcgccgcgcgctggattacctggtcggtttcaacctgtcgccggtgctgtggcgc
aaggtccagcgcggcctgtccgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcatcgcccgcgagtactggtcgatcgccgccgag
tgcgcgcacccgtcgcagcacttcaacgccaagctgatcaagctggacgggcagaagttc
gagcagttcaccatcaccgatggcgacaccgctgaagcggcgcggatgcgcatccagcag
gccgcgcagggcacgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtatgaaggcgtggcgattggtgacgaa
ggcaccgtcggcctgatctcgtacatgcgtaccgactcggtgaacctgtcgcaggatgcg
ctggccgagatccgcgacgtgatcgcccgtgactacggcatcgcctcgctgcccgaccag
cccaacacctaccagaccaagtcgaagaacgcccaggaggcgcacgaagcggtgcgcccg
acctcggccctgcgcaccccggcccaggtcgcccgcttcctcaccgacgacgagcgccgc
ctgtacgaactgatctggaagcgtgcagtggcctgccagatgattccggccacgctcaac
acggtcagcgtcgacctgtcggccggcagcgaacacgtgttccgcgccagcggcaccacc
gtggtcgtgcccggcttcctggccgtgtacgaggaaggcaaggacaacaagagtgccgag
gacgaggacgaaggccgcaagctgccggcgatgaagcccggcgaccgcgtgccgctggaa
cgcatccaggccgaacagcatttcacccagccgccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgttgttccgcaagtacgtggaaatggaaggccgcagcttccgcccgtccgatgtg
ggccgcgcggtgtccaagttcctgtccagccacttcacccagtacgtggattacgacttc
accgccaagcttgaagacgagctcgatgccgtctcgcgtggcgaagaagactggatcccg
ttgatgtcgcgcttctgggaaccgttcaaggaactggtcgaagacaagaaggaatcggtc
gaccgcgcggaggccagtggcgcgcgcgagctcggcaccgaccccaagaccggcaagccg
gtcagcgtgcggctgggccgcttcgggccctatgccgccatcggcagcaccgccgaggat
gccgaggagaagccgaagttcgcttcgctgcgccccggccagtcgatgcacaccatttcc
ctggaagacgcgctggagctgttcctgatgccgcgcgcactgggcgaggacaacggcgag
ccggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcacctatgcc
tcgctgaagaaggaggacgacccgtacaccatcgacctggcccgcgccgtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcgagggcagcgacatc
caggtgttgaacggccgcttcggcccgtacatcagcgacggcaggatgaacggcaagatc
cccaaggatcgcgaaccggcgtcgctgaccctggctgaagtgcagcagttgatggaagaa
accggcaagccggtgcgcaagggcttcggtgccaagaaggccgccgcgaagaaagccccg
gccaagaaggcggcagtgaagaaggaagccgcgccgaagaaggccgctgcaaagaaagcg
cctgccaagaaggccgctgcaaagaaagcagtaaagaaggccgccgcgaagaaggccccg
gcgaagaaggccgccaagaaggccgcgaagtaa
DBGET
integrated database retrieval system
