Stenotrophomonas maltophilia K279a: Smlt4214
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Entry
Smlt4214 CDS
T00718
Symbol
groEL
Name
(GenBank) putative GroEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smlt4214 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sml03019
]
Smlt4214 (groEL)
03110 Chaperones and folding catalysts [BR:
sml03110
]
Smlt4214 (groEL)
03029 Mitochondrial biogenesis [BR:
sml03029
]
Smlt4214 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sml04147
]
Smlt4214 (groEL)
Enzymes [BR:
sml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Smlt4214 (groEL)
Messenger RNA biogenesis [BR:
sml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Smlt4214 (groEL)
Chaperones and folding catalysts [BR:
sml03110
]
Heat shock proteins
HSP60 / Chaperonin
Smlt4214 (groEL)
Mitochondrial biogenesis [BR:
sml03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Smlt4214 (groEL)
Exosome [BR:
sml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smlt4214 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
Smlt4214 (groEL)
Exosomal proteins of breast cancer cells
Smlt4214 (groEL)
Exosomal proteins of colorectal cancer cells
Smlt4214 (groEL)
Exosomal proteins of bladder cancer cells
Smlt4214 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAQ47604
UniProt:
B2FIU9
LinkDB
All DBs
Position
complement(4327840..4329489)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVSAAVAELKNISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKANVDARVAQIKTQIQDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAITALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGDEPSVIINKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggatattcgtttcggtgaagacgcccgttcgcgcatggtgcgcggcgtc
aacgttctcgccaatgccgtcaaggccaccctgggcccgaagggccgcaacgtcgtgctg
gaaaagagcttcggcgccccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtgaaggaagttgcttcgcgc
accaacgacgatgccggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggccgttgccgccggcatgaacccgatggacctcaagcgcggtatc
gacaaggccgtttcggccgccgtcgccgagctgaagaacatctccaagccgaccgccgac
gacaaggcgatcgcccaggtcggtaccatctcggccaactcggacgagtcgatcggccag
atcatcgctgacgcgatgaaggaagtcggcaaggaaggcgtcatcaccgttgaagaaggc
tcgggcctggacaacgagctggacgtggtcaagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgcagaccgctgacctggatgacccgttcatc
ctgctgcacgacaagaagatctccaacgtccgtgacctgctgccggtgctggaaggcgtc
gccaaggccggcaagccgctgctgatcgtggccgaggaagttgaaggcgaagcgctggcc
accctggtcgtcaacaccatccgtggcatcgtcaaggtcgtggccgtcaaggctccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaagaagtcggcctgtcgctggagaaggccaccatcaaggacctgggccgcgcc
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgtcggcgacaaggcc
aacgttgatgcacgcgtggcgcagatcaagacccagatccaggacacctcctcggattac
gaccgcgagaagctgcaggaacgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgcctcgaccgaaatcgaaatgaaggaaaagaaggatcgcgtcgacgacgccctg
cacgccacccgtgcggccgttgaagaaggcgtggttccgggcggcggcgttgccctggtc
cgcgcgatcaccgcgctggccggcctgaagggcgccaacgaagaccagaaccacggcatc
cagatcgccctgcgtgcgatggaagccccgctgcgcgagatcgttgccaacgccggtgac
gagccgtcggtcatcatcaacaaggtcaaggaaggcaccggcagcttcggctacaacgcc
gccaccggcgagttcggcgacatgctgcagttcggcatcctggacccgaccaaggtgacc
cgttcggcgctgcagaacgcggcctcgatcgctggcctgatgatcaccaccgaagccatg
gttgccgaagctccgaagaaggacgagccggccatgggcggcgccggtggcatgggcggc
atgggtggcatgggcggcatggacttctaa
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integrated database retrieval system
