Stenotrophomonas maltophilia K279a: Smlt4533
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Entry
Smlt4533 CDS
T00718
Name
(GenBank) conserved hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sml
Stenotrophomonas maltophilia K279a
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sml03016
]
Smlt4533
Enzymes [BR:
sml01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Smlt4533
Transfer RNA biogenesis [BR:
sml03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Smlt4533
Prokaryotic type
tRNA splicing ligases
Smlt4533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Hexapep
Motif
Other DBs
NCBI-ProteinID:
CAQ47889
UniProt:
B2FML4
LinkDB
All DBs
Position
4652673..4653893
Genome browser
AA seq
406 aa
AA seq
DB search
MDTQQNYQWLHAEGTTPIKGWVNGVPLEAQAHEQLRNIAAIPFVGPWVAVMPDVHLGKGA
TVGSVIPTRGAIIPAAVGVDIGCGMAAVRTTLRADDLPDDLRQLRNSIERSIPVGNGRGG
EHHRMPDSIHTRLVQSGLAAGLEKIKDKHRRIRTDKLDRQLGTLGGGNHFIELCLDETDT
VWVMLHSGSRGTGNLIGTYFIEKAREELARRVLGFHLPDKDLAFFMEGEPLFDDYVEAVS
WAQDYARQNREAMMSRVLAEMRHRLPKFQLAAMAVNCHHNYVQKETHHGQELLVTRKGAV
SARQGELGIIPGSMGTRSYIVRGKGNEDSFHSCSHGAGRVMSRGTARQQITLAQHREATA
HVECRKDSGVLDESPAAYKSIDDVMAAQLDLVDVVHTLRQVLCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggacactcaacagaactatcaatggctgcatgccgagggcaccacgccgatcaagggc
tgggtcaacggtgtgccgctggaagcgcaggcacatgagcagctgcgcaacatcgccgcg
atcccgttcgtcgggccgtgggtggccgtgatgccggacgtgcacctgggcaagggcgcg
accgtcggctcggtgatcccgacccgcggggcgatcatcccggccgcggtcggcgtcgac
atcggctgcggcatggcggcggtgcgtaccacgctgcgcgccgatgacctgcccgatgac
ctgcggcagctgcgcaacagcatcgagcgcagcattccggtgggcaacgggcgcggcggc
gagcatcaccgcatgcccgacagcatccacacccggctggtgcagtccgggctggccgcc
ggcctggagaagatcaaggacaagcaccgcaggatccgcaccgacaagctggaccgccag
ctgggtacgctgggcggcggcaaccacttcatcgaactgtgcctggacgagacggacacg
gtgtgggtgatgctgcacagcggctcacgcggtaccggcaacctgatcggcacctacttc
atcgagaaggcgcgcgaggaactggcccggcgcgtgctgggcttccacctgccggacaag
gacctggcgttcttcatggaaggcgagccgctgttcgatgactacgtcgaagcagtgtcg
tgggcgcaggactacgcccggcagaaccgcgaggcgatgatgtcgcgcgtgctggccgag
atgcgccaccggctgccgaagttccagctggcggcgatggcggtgaactgccaccacaac
tacgtgcagaaggagacgcaccacgggcaggaactgctggtgacgcgcaagggcgcggtc
agcgcgcgtcagggcgagctgggcatcattcccggcagcatgggcacgcgcagctacatc
gtgcgcggcaagggcaacgaggacagcttccacagctgcagccacggcgccggccgggtg
atgagccgtggcacggcgcgccagcagatcacgctggcccagcaccgcgaagccaccgcg
catgtggaatgccgcaaggacagtggcgtgctggacgagtcaccggccgcgtacaagtcg
atcgacgatgtgatggctgcgcaactggacctggtcgacgtggtgcacacgctgcggcag
gtgctgtgcgtgaaggggtaa
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