Stenotrophomonas maltophilia K279a: Smlt4589
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Entry
Smlt4589 CDS
T00718
Symbol
polA
Name
(GenBank) putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03030
DNA replication
sml03410
Base excision repair
sml03420
Nucleotide excision repair
sml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smlt4589 (polA)
03410 Base excision repair
Smlt4589 (polA)
03420 Nucleotide excision repair
Smlt4589 (polA)
03440 Homologous recombination
Smlt4589 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sml03032
]
Smlt4589 (polA)
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt4589 (polA)
Enzymes [BR:
sml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smlt4589 (polA)
DNA replication proteins [BR:
sml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Smlt4589 (polA)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Smlt4589 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Smlt4589 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAQ47944
UniProt:
B2FND3
LinkDB
All DBs
Position
complement(4711080..4713854)
Genome browser
AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRVPGVEADDVIGTLALQGL
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMEKFGVRADQIIDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTDLALDASPTTLALREQDVPELTELYARYGFTQALKELGAPVPAPVAASEATPSLRGTA
AGFARGSVEAPAAGTLDPALSAPGEYETVLSAEQLQAWVERLQQADLISFDTETDALDAM
RARLVGISLAVEPGRAAYIPVGHDYPGAPAQLPMQQVLDALRSVLQDPAKKKLGQHGKYD
LHVLRRHGVQVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYSTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADITLRLHHALQPQLLAEPALDSVYRGIEMPLVPVLASIEANG
VRVDTDELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPEGFQLLAADYSQIELRIMAHLSEDPGLV
RAFEQGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVDVDQWLRDSGAPARMILQVHDELVFETESSFVEDLRLQVVERM
SQAAKLRVPLVVDTGVGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggtgaacccactggcgcactgttcggcgtggtcaacatg
ctgcgttcgacgctgaaggaacgcccggcctacgtcgcgttcgtggtcgatgcgcccggc
aagaccttccgcgatgacctgtacgaccagtacaaggccaaccgcccgccgatgcccgat
gagctgcgcagccaggtcgagccgatgtgccgcatcgtcgaggcgctgggcatcagcatc
ctgcgcgtccccggcgtggaagccgacgatgtgatcggcacgctggccctccagggcctg
gcgcaggacctgaaggtgaccatttccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcatcgagctggtcaacaccatgaccggaagccgcatggattcggatgcggcggtg
atggagaaattcggcgtgcgcgccgaccagatcatcgacctgctggcgctgatgggcgac
accgtcgacaacgtgccgggcgtggagaagtgcgggccgaagaccgccgccaagtggctg
gccgagtaccagcacctggatggggtgatggcggccgcgccgaccatgaagggcaagatc
ggcgaaaacctgcgcgcggcgctggagcgcctgccgctgaaccgcgagctggtgaccatc
cgcaccgacctggcgctggacgccagcccgaccacgctggccctgcgcgagcaggacgtg
ccggagctgaccgagctgtatgcgcgctacggcttcacccaggcgctgaaggagctgggt
gcgccggtgccggcaccggtggccgccagcgaggcgaccccgagcctgcgcggcactgcg
gccggcttcgcgcgtggcagcgtcgaggcgcccgccgccggcacgctggatccggcactg
tccgcgccgggtgaatacgagaccgtgctgagcgccgagcagctgcaggcctgggtcgaa
cgcctgcagcaggccgacctgatcagcttcgataccgaaaccgatgcgctggacgcgatg
cgtgcgcggctggtgggcatcagcctggccgtcgagccgggcagggcggcgtatattccg
gtcggccacgattacccgggtgcgccggcccagctgccgatgcagcaggtgctggacgca
ctgcgctcggtgctgcaggacccggcgaagaagaagctgggccagcacggcaagtacgac
ctgcacgtgctgcgacgccacggcgtgcaggtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaattccaccgccacccgccacgacatggattcgctggcgctgcgc
tacctgggctacagcaccatcaagttcgaggacgtggccggcaagggcgccaagcagatt
ccgttctcgcaggtgggcatcgacgaggccagccgctacgccgccgaggacgccgacatc
accctgcgcctgcaccacgcgctgcagccgcagctgctggccgagccggcgctggacagc
gtttaccgcggcatcgagatgccgctggtgccggtgctggccagcatcgaagccaacggc
gtgcgggtcgacaccgacgaactgcgccggcagagccaggacctgtcttcgcgcatgctg
gccgcgcagcagaaagccaccgagctggccgggcgcagcttcaacctggattcgcccaag
cagctgcaggcggtgctgttcgacgagttgaagctgccggcggtggtgaagacccccaag
ggccagcccagcaccaatgaagaggcgctggaggcgattgccgaccagcacgagctgccg
cgcgtgatcctggagtaccgcgggctggccaagctgcgcagcacctacaccgacaagctg
ccggagatggtcaacccggataccggccgcgtgcataccagctatcaccagtccggagcc
gccaccggccgcctgtcctcgtcggacccgaacctgcagaacatcccgatccgcaccgag
gacggccgtcgcatccgccgcgcgttcgtggcgccggagggcttccagctgctggcggcc
gactattcgcagatcgaactgcggatcatggcccacctgtccgaggacccgggcctggtg
cgtgccttcgagcagggcgccgacgtgcaccgtgccaccgccgccgaggtgttcgggcgc
acgctggaggaagtgaccccgaacgagcgccgcgccgccaaggcgatcaacttcgggctg
atgtacggcatgagcgccttcggcctggcccgcaacctgggcatcgaccgtggccaggcg
caggactacgtggcgctgtacttcagccgctacccgggcgtgcgcgatttcatggagcgg
atgcgccagcaggcccgcgaccagggctatgtggaaaccctgtttggtcgtcgcctgtac
ctgaacgacattcatgcacgtaaccagggcctgcgcgccggtgccgaacgggcggcgatc
aacgcgccgatgcagggcaccgccgccgacatcatcaaacgcgcgatggtggacgtggac
cagtggctgcgtgacagcggcgcaccggcacggatgatcctgcaggtgcacgatgaactg
gtgttcgaaaccgaaagcagtttcgttgaagacttgcgtttgcaggtggtcgagcgcatg
tcgcaagcggccaaactgcgggtgccgctggtggtcgataccggcgtcggcaacaactgg
gacgaagcgcactga
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