Stenotrophomonas maltophilia K279a: Smlt4602
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Entry
Smlt4602 CDS
T00718
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03030
DNA replication
sml03430
Mismatch repair
sml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smlt4602
03430 Mismatch repair
Smlt4602
03440 Homologous recombination
Smlt4602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sml03032
]
Smlt4602
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt4602
Enzymes [BR:
sml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smlt4602
DNA replication proteins [BR:
sml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Smlt4602
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Smlt4602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF6031
Motif
Other DBs
NCBI-ProteinID:
CAQ47956
UniProt:
B2FNE5
LinkDB
All DBs
Position
complement(4724590..4725099)
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AA seq
169 aa
AA seq
DB search
MSRIVALDTETTGISHRLGHRVIEIGAVELIDGQLTGRQFHTYLQPQRKVDWGAQRVHGI
SDAMLVGKPLFSSKAAELLEFLRGSEMVAHNATFDVGFLDNELRLSGIPGTLAQHCRITC
SLKLARGRWPGQGNKLDDVLQRLRIPSQRGLHGALKDAHLLAQVIPHLR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcatcgttgcactggataccgaaaccaccggcatctcccaccgcctggggcac
cgggtgatcgaaatcggtgccgtcgaactgatcgatggccagctcaccggccgccagttc
cacacctacctgcagccgcagcgcaaggtggattggggcgcacagcgcgtgcacggcatc
agcgatgcgatgctggtgggcaagccgctgttctccagcaaggcggccgaactgctggag
ttcctgcgcggcagcgagatggtcgcccacaacgctaccttcgatgtgggcttcctggac
aacgagctgcgcctgtccggcatccccggcacgctggcccagcactgccgcatcacctgc
agcctgaagcttgcgcggggacgctggccgggtcagggcaacaagctggatgatgtgctg
cagcgcctgcgcattcccagccagcgcggcctgcatggcgcgttgaaggatgcgcacctg
ctggcgcaggtgattccgcacctgcgctga
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