Schistosoma mansoni: Smp_000340
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Entry
Smp_000340 CDS
T01095
Name
(RefSeq) nuclear hormone receptor superfamily protein-related
KO
K08701
nuclear receptor subfamily 1 group D member 3
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_000340
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smm03310
]
Smp_000340
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
Smp_000340
Nuclear receptors [BR:
smm03310
]
1. Thyroid hormone like
1D. Rev-Erb
Smp_000340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ctf19_RWD2
DUF6401
Motif
Other DBs
NCBI-GeneID:
8340976
NCBI-ProteinID:
XP_018645358
UniProt:
Q2TUU3
LinkDB
All DBs
Position
3
Genome browser
AA seq
1087 aa
AA seq
DB search
MAISPESNFDLKADPGSASFSDSGVSSSFSLKTNASASVSIIPSPPLSGFPGCTDSNGSP
SLDQPYLNFPNKTYPGFSDCSNLPMSANHPYPLPSRHSFPQGFLPSPPSAYASNYTSSHG
VSNSFYQRQVPSTICSAPNSNYGLSQIFPHDMLQNSMLVNRDQHNGSVSSLEGHFSQHPD
HGQFPYSDPFHPPDLRPLHITTSPRQLGPHNSHTNMGDVTCTDSIVKISPRGSPNGVPDH
SITPCGTVSSGPGSMVNCRSSRTIERGSEVSAADSNSNVGSIKATFTPCKVCGDKASGYH
YGVISCEGCKGFFRRSIQKQIEYKCLRDGKCLVIRLNRNRCQYCRFRKCLAAGMSKDSVR
YGRMPRRTRGSDCGRDGSDQLMSMQHNSSTNSVRIDSTIGNGSGHVSAFIPPPSCTSELS
GNSAVVGAAVATTTTTTNMTTGRYGVCSRPGNDHLGLYETILTISQAYQNFSPYTDEKIK
VMRCRPITLSNVTREFWPEKVDEHRLRMHEELSQLLAPCIQHVVEFAKRIPEFSSLGQPD
QLVLIKAAFFEVWLVQASRLISTNDRKITLADGKQITKQELDFIYSPSVVCSIFSFSENF
NSLVLNDTEVALCCAAVITKPNRYGLIEPNKVAIIQDHHLAALRMQLERNRPREATLIGQ
VRNVINQVTTVGDEVQLCIRWYRENWYRTRLAPLYAETYDIPHEDTSTVPISNQGAPTPL
PNPSQHTGNSYPICPNISSVCPQAIPYGDVTNTTPLNYGSSTVSIPQAVHHHYPNQSINR
SDISNMIPSCSINENMIYCNNSNNSNGNRIQTGNIDHCSSDGQIHDVTQKQNSQHQIHQQ
SHLIPDSSHMRGSYSSTTNLSSNSDSPLNNQSHPFSGQFNYHDNSITYNPSNSNAYSNSR
DCSPSSTQMLSTNYLVPSPQQQQQQRSQVSALQSSQYSCSSAITSPQRQVTSSVQSTGII
STQNQNDHMNLNKSIISVKNHSSRSNTPTSYNNNIIHPSSTNESLPPLWTNMNPDSNNNN
GNNGLNDHTISSNGGTPEIQQQSHHQQYHTSPISQSDLMNTTPDTNHNLNALSSPINETL
SCEQQDA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcaataagcccagaatcaaatttcgacctcaaagcagatcctggaagcgcatcattt
tctgattctggtgtaagcagcagtttctctttaaaaactaatgcgagtgcctctgtgtca
atcattccctcccctcctttatctggatttcctggatgcacagattcaaatggttcccca
tcacttgatcagccatatctaaatttcccaaataaaacttacccaggattttcggactgt
agcaatttacctatgtctgctaatcacccatatcctttgccgtctagacattcttttcct
caaggttttttacccagtccaccgtcagcctatgcttcaaattacacctcttcacatggc
gtttcaaattcgttctatcaacgtcaggttccgtccaccatttgttcagctcctaacagc
aactacggtttgtcacagatatttcctcatgatatgttacaaaattccatgcttgtcaac
agggatcaacataacggttctgttagttcgttagaaggtcatttttcccagcatcctgac
catggacagtttccatattcagatccgttccacccccctgatttacgtccacttcacatc
actacgtcacctcgtcagttaggtcctcacaacagccatactaatatgggtgatgtaacc
tgtacagattctattgtaaaaatttcacctcgaggttctcctaacggcgtacccgatcat
tctattaccccttgtggaacagtcagctctggtcctgggtcaatggttaactgcagatca
tctagaaccatagaaagaggttctgaagtatctgctgctgatagtaattctaacgttgga
tccataaaggcaacattcactccttgcaaggtatgtggtgacaaagcaagtggctaccac
tatggggtgatttcttgtgaaggttgcaagggtttctttcgtcgaagtattcaaaaacaa
attgaatataaatgtttaagagatggaaaatgtcttgtaatacgtttaaatcgtaatcgt
tgtcaatattgtcgttttcgtaaatgtcttgctgctggtatgtcaaaagatagtgtacga
tatggtcgaatgccaagacgaacacgtggttctgactgtggaagagatggttcagaccag
ctaatgtcaatgcagcataattcatctacaaattcagtgagaattgattcaactattggt
aatggtagtggacatgtttccgcttttattccaccaccttcatgtacatcagaattatcg
ggtaattcagcagtagtgggagcggcagtggcaacgacaacaacaaccacaaatatgact
actggtcgttatggtgtatgtagtagaccagggaatgatcatcttggtttatatgaaact
atactaactataagtcaagcttatcaaaatttctctccatatactgatgaaaagattaaa
gttatgcgatgcagaccaatcactttgtcgaatgtgacacgtgaattttggcctgaaaaa
gtggatgagcatcgattacgtatgcatgaagaattaagtcaattattggcaccatgtata
caacatgttgtagaatttgctaaacgtatccctgaatttagttcacttggtcaaccagat
caattggtattaattaaagcagcattttttgaagtatggcttgttcaagcatcacgttta
atatcaacaaatgatcgtaaaataacactagctgatgggaaacaaattactaaacaagaa
ttagattttatatattcgccgagtgttgtgtgttcaattttttcattctccgaaaatttc
aattcattagtgctgaatgataccgaagttgctctttgttgtgctgctgtcatcactaaa
ccaaatcgttacggtttgattgaaccgaataaagtagccattatccaagatcatcattta
gctgctcttcgtatgcaattagaacgtaatagaccaagagaggctacgttaattggacaa
gtacgaaatgtgattaatcaagtgactacagttggagatgaagtacagttatgtattcga
tggtatagagaaaattggtaccgcacacgattagcaccattatatgctgaaacatatgat
attccacatgaagatacttccactgtacctatatccaatcagggtgcaccaacacctctt
cctaatccttctcaacatacaggtaattcatatcctatatgtccaaatatttcatctgtt
tgtccacaagctattccatatggtgatgtcacaaatacaacaccattaaattatggttct
tcaacagtatctattccacaagctgttcatcatcattatccaaatcaatctattaataga
tcggatatttccaacatgataccatcttgttcaattaacgaaaacatgatttactgcaat
aatagcaataatagtaatggaaatagaattcaaacaggtaatattgatcattgttcttct
gatggtcaaatacacgatgttactcaaaaacaaaactcacaacatcaaattcatcaacaa
tcacatttaattccagattcatctcatatgagaggatcttattcgtcaactacaaatttg
tcatcgaattctgattcacctttaaataatcagtcacatccattttctggacaatttaat
tatcatgataattcaataacctataatccatccaattcgaatgcatactcaaattccaga
gattgttctccttcttctacgcaaatgctttcaacaaactacttggtgccatcacctcaa
caacaacaacaacaacgaagtcaagtatctgctttacaatcatctcaatactcttgttct
tcagcaataacctcacctcaacgtcaagtcacttcatcagtgcaatcaacaggaataata
tcgacacaaaatcaaaatgatcacatgaatttaaataaatcaataatttcggttaaaaac
catagttcacgctctaatactcctacatcttacaataataatataattcatcctagtagt
acaaatgaaagtttgccacctttatggacaaatatgaatcctgacagtaataataataat
ggtaataatggtctaaatgatcatacaatcagttcaaatggtggaacaccagaaatccaa
cagcaatcacaccatcaacaatatcatacctcaccaatctcacaatcagatctgatgaat
actactcctgacactaaccataacttaaatgcattatcttcacctatcaatgaaacttta
tcatgtgaacaacaagatgcatag
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