Schistosoma mansoni: Smp_001560
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Entry
Smp_001560 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_001560
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_001560
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_001560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
SWIM
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8_fungal
SLX1_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
8343816
NCBI-ProteinID:
XP_018650208
LinkDB
All DBs
Position
2:complement(18053778..18063146)
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AA seq
576 aa
AA seq
DB search
MSNYISHQIKRPDIVRRNQEEARSATLYILKQYGPTFYLLQDGLKQKYKVQLGDVHTCSC
GNFTKNRELCVHLCWMLIRRFKVDPNNPVSWQPGLVEREISALLDGQHSVMNNVTNVTGP
KLLNEDKFDEKPSYNLQRKIGENDICPICQEYLFTQIRHPVTFCRKNCGNSLHIRCMKVW
TEYQRKQNPLGLMDYVKCPICREDFAPLHVLIREFTENLKKDNKKSTESKHIHIMTIIGQ
ANDAQRKLNIETMQTKHSNTRCLSCLRSPILGNIYRCEICYQLEQDENLNPFLCSLCFRS
DKHLQHDLYVYRETPYGKWLEVPPNRGAIINVSGQLVNKVQENSENLQLSSTEKFNHLLI
DEECKPLQLAELAQIHQWTIRIPKNHFDFTSSKSSDKETNNDNKIKSVKRKLSTSSNLFS
ERSVTLFSMGLLSPGRQCLLCLMFFKVNDKVRLLSPGCQHTFHSHCIDPWLLHKSSTCPI
DNTPIRPEKTINKKSSTNRTPRQRTDEMLNDNLSELKIFAKHIEAINLLVNRTVIVQHPN
MRHVKIKELKNHSSEMYKPFEDRTLCHLDHVVIILT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactacattagccatcaaattaaacgcccggatattgtcaggagaaaccaagaa
gaagcacgaagcgccacactatacattttaaaacagtatggaccaacattttacttgcta
caagacggtttaaagcaaaaatataaggtacaacttggtgatgttcatacttgctcgtgt
ggtaactttacaaagaatcgtgaactatgtgttcatttatgctggatgttaattagacga
ttcaaagtagacccaaataatcctgtatcatggcaacctggattagttgaacgagaaata
tcagctcttttagatggacagcactcagtaatgaataatgtcacaaatgtgactgggcct
aaacttctgaatgaggataaatttgatgaaaagccttcatataacctacaacgcaaaatt
ggagaaaacgatatttgcccaatatgccaggaatacctttttactcaaatacgacatcca
gtaacattttgccgtaaaaattgtggtaacagtctacatatacggtgtatgaaagtatgg
acagagtatcaaagaaagcaaaacccattaggattaatggattacgtaaaatgtcctatt
tgtcgagaggattttgcacccttacatgttcttattcgggaatttacagaaaatttgaaa
aaagataataaaaagtctaccgaatcgaaacatatccatattatgaccattatcggtcaa
gcaaacgatgcacagagaaaactgaacatagaaacaatgcaaacaaagcattcaaataca
cgatgtttatcatgtttacgctcaccaatattaggtaatatttatcgttgtgaaatatgc
tatcaattagaacaagatgaaaatttaaatccatttttgtgttcactatgttttcgttct
gataagcatttacaacatgatctatatgtttatagagagacaccatacggcaaatggctt
gaagtaccacctaaccgaggtgctattataaatgtctctggacagttagtcaacaaagtt
caagaaaatagtgaaaaccttcagttaagctcaacagaaaaattcaaccatttgttaatt
gacgaagaatgtaaacctcttcaattagccgaactagcacaaattcatcagtggacaatt
agaattccgaaaaatcattttgatttcacctcgtcaaaatcgtcggataaagaaactaat
aatgataataaaattaaatctgtgaaaagaaagttatcgacaagttctaatttattttcg
gagcgttcagtgacattattttcgatgggattgttgtcaccaggtcgtcaatgccttctt
tgtttaatgttttttaaggttaatgataaagttagactactgtcacctggctgtcaacat
acttttcattcacattgcattgatccgtggctacttcataagtcatcaacatgtccaatt
gataacacacctattcgtcctgaaaaaacaatcaataaaaagtcgtcgacaaatcgtaca
ccaagacaaagaactgatgaaatgttgaatgacaatttgagtgaattaaaaatttttgca
aaacatattgaagccatcaacttattggtaaacagaaccgtgattgtacaacatccaaac
atgagacatgtgaaaattaaagaattaaaaaatcattcaagtgaaatgtataaaccattt
gaagatagaacactatgtcatttggaccatgttgttattatattaacatga
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