Schistosoma mansoni: Smp_002010
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Entry
Smp_002010 CDS
T01095
Name
(RefSeq) putative nep1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
smm
Schistosoma mansoni
Pathway
smm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smp_002010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_002010
Enzymes [BR:
smm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
Smp_002010
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
Other 90S particles
Smp_002010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
DUF1264
Motif
Other DBs
NCBI-GeneID:
8343870
NCBI-ProteinID:
XP_018652930
UniProt:
G4VLH6
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All DBs
Position
6:2444113..2447332
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AA seq
233 aa
AA seq
DB search
MPENDAVRLYILLDQASLESVKASSGKEFQLLNPDRHKDRILKAGVDVATVRPDITHQCL
LMLLDSPLNRVGKLQVFIRTRKNVIIEVNPKTRIPRTFDRFCGLMVQLLHKLSIHAEGGN
REKLLKVVKNPVTRHFPIGAPVITMSFSSKEQIKPLQLAEETQKPNPQSVVIVIGALAHG
SVVDTCKEFIQRTVSISNFPLSAAQTCARICTAFEEVWCVEDILNGEKTQVET
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaacgacgcagtgagactatacattttgcttgaccaggcctcactagagtca
gtgaaggcgtctagtggaaaagagtttcaactgcttaatcctgacagacataaagatcgg
attttaaaggccggtgttgatgtagccacagttcgtccagatattactcatcaatgtcta
cttatgctacttgatagcccactaaaccgagttggtaaactacaggtttttattcgaaca
agaaaaaatgtgataattgaagtgaaccctaaaacaaggataccacgtacgtttgatcga
ttttgtggacttatggtacaacttttacacaaactctcaatacatgctgaaggtggcaac
cgtgaaaaactattaaaggtcgtcaaaaaccctgtaacacgacactttccaattggtgct
ccagtaattacaatgtcgttttcatcaaaggaacaaattaaaccacttcaactagctgaa
gagacacagaagcctaatcctcaatcagttgtcattgttattggtgcattagctcatggt
tcagttgtcgatacttgtaaagagtttatacaacgtacagtcagtattagcaacttccct
ttatcggccgcccagacatgcgctcgaatatgtactgcatttgaagaagtatggtgtgtt
gaagatattttaaatggagaaaaaacgcaagtagaaacctga
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