Schistosoma mansoni: Smp_007660
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Entry
Smp_007660 CDS
T01095
Name
(RefSeq) putative transcription elongation factor s-II
KO
K03145
transcription elongation factor S-II
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_007660
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Smp_007660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
CCD
Motif
Other DBs
NCBI-GeneID:
8342616
NCBI-ProteinID:
XP_018653975
UniProt:
A0A3Q0KC17
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Position
W:complement(8584617..8597151)
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AA seq
318 aa
AA seq
DB search
MEETEHVARRLDRMLKNKKIDDESALKYLRRLRSIEMTLEILTKTGVGIIINKIRKESED
PEVATLGKNMIKQWKKLVPDKSEAPVSCTNTVGNNNSDNGNNNDNKHSPESNSYNACDDG
PQEAKRSRPSEKKESTEISGNASRGFFPVHTLTTTDQVRLKAREMLQSALESGNIPSGAY
ESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASM
TSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADE
PMTTFVYCNNCGHRWKFC
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagagactgaacatgttgcccggcggcttgaccgcatgttaaaaaacaaaaaaata
gatgatgagtctgcgctaaaataccttaggagattgcgaagcatcgagatgactctggaa
atcttaacaaaaaccggtgtgggtataattatcaataagataagaaaggagtcggaagat
ccggaggttgctacattagggaaaaacatgatcaagcagtggaaaaagcttgtcccagac
aaaagtgaagctcctgtatcttgcacgaatactgttggcaacaacaatagtgacaatggc
aacaataatgataataaacattcacctgagtcaaatagctacaatgcctgtgacgatgga
ccacaggaagccaaacggtctcggccaagtgaaaagaaggaatctacagaaatatcggga
aatgcaagtcgtggattttttcctgtccacaccttgactacaacggatcaagtacgttta
aaagcccgggagatgcttcaatcagcactagaaagtggcaatattcctagcggtgcttat
gaaagtgagttcctagcgatacgaatagaaagctccatatatgaccttttcaacaatact
gatcccaagtacaaacaacgagtacgcactagagttatgaatctacgcgattctaataat
cccaatttgcgacttaatgtcctaatgggacacgtgagtccggataaactagcatctatg
acatcagaagagatggctagtaaagaaatgaaagaacttcgtgagaaatatactaaagaa
actatagaagaccatcaaatggctgtaactggtggtacagaaactgatttattacgatgt
ggaaagtgtaagcaaaccaagtgtacatataatcaggtccaaactcgtagtgcagatgaa
ccaatgaccacttttgtctattgtaacaattgcggccaccgttggaaattttgctga
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