Schistosoma mansoni: Smp_008545
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Entry
Smp_008545 CDS
T01095
Name
(RefSeq) heat shock protein HSP60, putative
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smp_008545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_008545
03110 Chaperones and folding catalysts [BR:
smm03110
]
Smp_008545
03029 Mitochondrial biogenesis [BR:
smm03029
]
Smp_008545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_008545
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Smp_008545
Messenger RNA biogenesis [BR:
smm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Smp_008545
Chaperones and folding catalysts [BR:
smm03110
]
Heat shock proteins
HSP60 / Chaperonin
Smp_008545
Mitochondrial biogenesis [BR:
smm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Smp_008545
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smp_008545
Exosomal proteins of other body fluids (saliva and urine)
Smp_008545
Exosomal proteins of breast cancer cells
Smp_008545
Exosomal proteins of colorectal cancer cells
Smp_008545
Exosomal proteins of bladder cancer cells
Smp_008545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8350720
NCBI-ProteinID:
XP_018645622
LinkDB
All DBs
Position
4:complement(<188514..>191484)
Genome browser
AA seq
558 aa
AA seq
DB search
MLRAFATLRGTLAPVRHRVIQRSYAKEVKFGADARSAMLVGVDILADAVAVTMGPKGRNV
IIESSWKSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARA
IAKEGFEKISKGANPIEFRRGVMSAVDAVVKELKSLSKPISTPEEIAQVATISANGDKAI
GDLIATAMKKVGNDGTITVKMKFDRGYISPYFLNTEKGARCEFQDAFVLFSEKKINSIQT
LLPALELCHQQKRPLLIIAEDVEGEALTALVLNRLKLGLQVCAVKAPGFGDNRKNTLKDM
AVATGGIVFGDEADMYKLEDVQLQDLGRVAEVVVTKDDCLLMRGRGSKTDVDKRIAQIKE
EMEASNSEYEKEKMHERLAKLSNGVAVIKVGGSSEVEVSEKKDRYTDALNATRAAIEEGI
VPGGGTALLRCIPILKSLESKNEDQRTGVQIVLRALSTPCYTIAHNAGVNASVVVEKVMG
MGQNMGYDAQNDAYVDMIEAGIIDPTKVVRTALVDAAGVASLLTTAETVVTDLPKEETGA
NAAGMGGMGGMGGMGGMM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgcgttcgctacattacgtggtaccttggctcctgttagacacagagttatt
caaaggtcttatgctaaggaggttaaatttggagctgacgcaagatcagctatgttggtt
ggcgtcgacatactcgcggatgctgtcgcagttaccatgggccctaaaggtcgtaacgtt
ataatagaaagctcgtggaaatctcccaaaattaccaaagatggggtgactgttgccaaa
ggcatcgagctgaaggataagtttcagaatataggagccaaattggtacaggatgttgct
aacaacacaaatgaagaggctggggatggtacaacaacagctactgttttagctcgagcg
atagctaaagaagggtttgaaaagatcagcaagggtgcaaatcccattgagttccgaaga
ggcgttatgtctgcagttgatgctgtcgtcaaagagctcaagtctttgtcgaagccaata
tcaaccccagaggaaatagcacaagtcgcaacaatatcagccaacggtgacaaagcgatt
ggcgatctaattgctactgctatgaagaaggttgggaatgatggtacgataactgtcaag
atgaaatttgatcgtggctacatctccccttacttcctcaatactgaaaagggggcgcga
tgcgagtttcaagatgcttttgtactgttttcagagaaaaagattaacagcatccaaacg
ttactgccagctctcgaactgtgtcatcaacaaaagcgaccactacttatcatcgctgaa
gacgtagagggtgaggccctcacagctcttgtactcaaccggctgaaactcggtttacaa
gtttgtgcagtgaaggcaccgggtttcggagacaaccgcaaaaatactcttaaagatatg
gcagtggcgactggtgggattgtgttcggcgatgaggcggatatgtacaagttggaagat
gtacaactacaagatctgggacgtgtggctgaggttgtggtaactaaagatgattgcctg
ttgatgcgtggtcgtggaagcaaaacagatgtcgacaaacgcatcgcgcaaatcaaagaa
gagatggaagcttctaacagtgaatatgagaaagaaaaaatgcatgagcgtctagctaag
ctgtctaacggtgttgcggtcatcaaggttggcggaagtagtgaagtagaagttagtgaa
aagaaggatcggtatactgatgcacttaacgcaacacgggcagcgattgaagaaggaata
gttcccggtggtggcactgctttgcttcgttgtatcccaatcttaaaatcgctggaatcc
aaaaacgaagatcaacgcacaggtgtccaaatagttctgcgtgcactttcaactccttgt
tataccattgcacataatgccggggtgaacgcgtctgttgttgtagaaaaagtcatgggc
atgggtcaaaatatgggttatgacgcccagaatgatgcttatgtcgacatgatcgaagct
ggaattattgatcctaccaaagtcgttcgaactgctttggttgatgccgctggcgttgct
tctctattgacaactgcagaaaccgtggtaactgatttaccaaaagaagagacaggagca
aacgctgcaggaatgggtgggatgggaggtatgggtggaatgggtggtatgatgtag
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