Schistosoma mansoni: Smp_012000
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Entry
Smp_012000 CDS
T01095
Name
(RefSeq) acetylcholine receptor-related
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
smm
Schistosoma mansoni
Pathway
smm04080
Neuroactive ligand-receptor interaction
smm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
Smp_012000
04082 Neuroactive ligand signaling
Smp_012000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smm04040
]
Smp_012000
Ion channels [BR:
smm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
Smp_012000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
8341547
NCBI-ProteinID:
XP_018654359
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Position
W:complement(18619127..18624825)
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AA seq
744 aa
AA seq
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MRWTDPRLTWDPEEFSEIQEVSLPTTNLWIPDVGVMNGKASTDFDFSAGVRGRVTVSNDG
SVTWLHGAVLDVTCPLDVSFFPFDYQTCFLILVPWQSGEQQLLLQPFTHGSAVDNSYLPN
SNVSEWEIQSVHFVRKKYRSDMNVTYQYVSIAIHLKRQPLYFIVLVLVPFSMLSALACLI
FTLDDTGDRLSVALSLVLSMTMYVVIVSTNAPRSMRTLPVLGIFLLDQLGLLSIATILAV
MNNKLYQSTELLNWQDFIYAISGTGQGKRRNSEPYSEHLYVNRHIHDNHNYNNRNKTSRN
NTNRQEPKYKSSLQQTDQLIEKSTSRQQYYFKKYCKPVKLLSRKSNKTVNTNSNSNCGKS
NNQSNRYFPIHPDSGHFINHCDPEVILNATNLTSDVKYRPIDPDSDSPIGQVNKISRPKF
LDSANSNIIHNINTFKNSNTEIKNSTISDKQDIMKCHDYKMIHPRIHNSDFLNKSHFIKN
KPKGSISERSPWREHLPMSYDQIMKQKYPMKSSYKYAAPSVTESSPSDDEEDDCINSDTD
EVDSDTSERIFRTTVTATAAAALAATRVIASDYGVTDLNPSQLKIYGAKANANTNKNASG
FYETARSRKCIRNDLPIKTVEELDHIDSKLAAQAAINAAFEAAAQTYQLSKEYTRHHNHR
HSYHFPPSKCGKSHKRSLLSNSSYNHCTDYPAELNPYPYRKLASRLDCIQMIIYLFLSTI
NAIACLIIMPKYSQDSNPPAHLIS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagatggactgatcctagattaacttgggatccagaggagttctctgaaattcaagaa
gtcagtctaccaacaacaaatttatggataccagatgtgggcgtgatgaatggtaaagca
tccactgatttcgattttagtgcaggtgtaagaggacgcgttaccgtaagcaatgacgga
tcagttacttggcttcatggcgcggttctagatgtgacatgtccccttgatgtatcattt
tttccgtttgattatcaaacatgttttctgattcttgttccatggcaaagtggtgaacaa
caattacttttgcaaccattcacacatggttcagcagtggataatagttacttacctaat
tctaatgtcagtgaatgggaaattcaatctgttcattttgtacggaaaaaatatcgtagt
gatatgaatgtcacttatcaatatgtgagtattgctatccatcttaaaagacagccgctg
tattttattgtacttgttcttgttccattttcaatgttatctgctcttgcatgcttgatc
ttcacattagatgatacaggagatcggttatcagttgcactttccttagttctcagtatg
actatgtatgtggtgattgtgtcaacaaatgctccccgctcaatgaggacattacctgtt
ttaggtatatttctactggatcagctgggcctcttaagtattgcgacgatacttgctgta
atgaacaacaaactataccaatcaacagaactactaaactggcaagatttcatttatgca
atctcaggtacgggacaaggtaaacgacgtaatagtgagccatactctgaacacctttac
gttaatagacacatacatgacaaccataattataataacagaaataaaacatcacgcaat
aacacaaacagacaagaaccaaaatataaatcgtcactacaacagacagaccagttaatt
gagaagagtacttccagacaacagtactattttaaaaagtactgcaaacctgtaaaactt
ttatcacgtaaaagtaataagaccgttaatactaatagtaacagtaattgtggtaaaagt
aataatcaatcaaatcgttattttccaatccatcctgacagcggacacttcataaaccat
tgtgatccggaagttatcctaaatgctacaaatttaacatcagatgtcaaatatcgtcct
attgacccagactctgacagtccgattggacaagtgaataaaatatcaagacctaaattt
ttagattcagctaattccaatattattcataatattaatacttttaagaatagtaatact
gaaattaaaaacagtactattagtgataaacaagatataatgaaatgtcatgattacaaa
atgatacatccgagaatacataatagcgattttttaaataaatctcattttataaaaaac
aaacctaaaggcagtatttcagaaagatctccttggagagaacacttaccgatgtcatat
gaccaaataatgaagcaaaagtatccaatgaagtcatcatacaaatacgccgcgccatca
gtaactgaaagttcaccaagtgatgacgaagaagacgattgtataaacagtgatacagat
gaagtggacagcgatacttcagaaagaatattccgaacaactgtaacagcaactgcagca
gctgccttagcagctactcgtgttattgcttctgattatggtgtaacagatttaaatcca
tctcaactaaaaatatatggagcgaaagcaaatgctaacacaaacaaaaacgcttctggt
ttttatgagacagctagatcaagaaaatgtatccgaaatgacttaccaatcaaaacagtg
gaagaacttgatcacattgattctaagttagccgctcaagcagcaataaatgcagcgttt
gaagcagctgcacaaacttatcaactgagtaaagaatatactagacaccacaatcaccgt
cattcatatcatttcccaccatctaagtgtggaaaaagccataaacgaagtttattaagc
aatagtagttataatcactgcactgattaccccgcagaactaaatccatatccgtatcgc
aaattagcttcacgtttagactgtatacaaatgataatttatcttttcttatcaacgata
aatgctattgcttgtctcataattatgccaaaatattcacaagattctaatccaccagcc
catttgatctcttaa
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