Schistosoma mansoni: Smp_012110
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Entry
Smp_012110 CDS
T01095
Name
(RefSeq) ribonuclease pH related
KO
K11600
exosome complex component RRP41
Organism
smm
Schistosoma mansoni
Pathway
smm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smp_012110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_012110
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Smp_012110
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Smp_012110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8341558
NCBI-ProteinID:
XP_018654368
UniProt:
G4VS08
LinkDB
All DBs
Position
W:18862899..18867307
Genome browser
AA seq
258 aa
AA seq
DB search
MAEIFYNGRRVDGRRPNEIRRVDCQFGSGYSDGIVFLHQGNTKVIASVVGPHAPRVKGDG
TPDGATITCQFTKPPFASTSGERRKLSSKDRSANDFATAIEEIFSCVIRTEKYPMSQIDI
FLEVIQSDGSEFACAVNATTLALTDAGIEMDCLVSAATVGLWGSHVFADLCRFEENPRIS
QLTVVCLPNVHLLSGVNTEEQIGQWKSQPQILHTRLSSWLPVERLQPLITEAVKVAQTLQ
KEFSYWLRGRVRSGFITR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatattttataacggtaggagagttgatggtcgcagaccaaatgaaattcga
cgagtagattgtcagtttggctcgggttattctgacggaatagtatttctgcatcaaggg
aataccaaggtgattgcatccgtggttgggccccatgctcctagagtaaaaggtgatggt
actccagatggtgcaacgataacgtgtcaatttactaagcctccttttgcatcgacttca
ggggagcgtcgcaaactgtcatcaaaagatagatcagcgaatgattttgctactgccatt
gaggagatattttcatgtgtcatcaggacagaaaagtacccaatgtctcaaatagatatt
tttcttgaagttattcagtcagatggctctgagtttgcttgtgctgtaaatgcaaccaca
cttgccttaactgatgctgggattgaaatggattgcctcgtcagtgcagctacagttggt
ctttggggttcacatgtgttcgctgacctttgtcgctttgaggagaatccacgtatatca
cagttaaccgttgtttgtcttcccaatgttcacctgctttccggagtgaatacagaggag
caaataggtcagtggaaaagccaacctcaaatccttcatacacgtctctcttcttggtta
cctgttgagagactacaaccactcataacagaagctgtgaaggtagctcaaacacttcaa
aaggaattttcttattggttacggggccgtgtacgtagtggttttatcaccagatga
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