Schistosoma mansoni: Smp_012530.1
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Entry
Smp_012530.1 CDS
T01095
Name
(RefSeq) transcription elongation factor SPT4-like protein
KO
K15171
transcription elongation factor SPT4
Organism
smm
Schistosoma mansoni
Pathway
smm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Smp_012530.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_012530.1
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_012530.1
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Smp_012530.1
RNA polymerase I system
Smp_012530.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Smp_012530.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
zf-C4
Motif
Other DBs
NCBI-GeneID:
8341606
NCBI-ProteinID:
XP_018648127
UniProt:
Q15ER1
LinkDB
All DBs
Position
1:complement(21500077..21503403)
Genome browser
AA seq
117 aa
AA seq
DB search
MAVNSVIPSELRQLRACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDG
LLAMMSPNDSWVARWQMIDKLTPGVYAISVYGSLPSDIVHYLRSKGISYRSLDKSGK
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaattccgttatcccatcagaactacgtcaattaagagcctgcttattatgt
ggtctagtgaaaactcttaaccaatttcaactaaacggatgcgaaaactgtgaggacttt
ctaaagatgcaaggagaccgagaaaaggtatacgaatgttcttctgccaactttgatggt
ttactcgctatgatgtcaccaaacgacagttgggtcgccagatggcagatgattgataaa
cttacgccaggtgtttatgcaatcagtgtttacggatctcttcctagtgatatagtgcac
tatttacgaagcaaagggatttcttatcgatcattagacaaaagtggtaaatag
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