Schistosoma mansoni: Smp_013600
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Entry
Smp_013600 CDS
T01095
Name
(RefSeq) putative nk homeobox protein
KO
K09349
homeobox protein Nkx-5
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_013600
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
Smp_013600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
8345452
NCBI-ProteinID:
XP_018650976
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All DBs
Position
3:complement(9917141..9919856)
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AA seq
542 aa
AA seq
DB search
MSERDSINHIKSINEINNKCFINNNDSHNNQLANFMNLLNFHSRLSTEYSTSNWSNEMQL
YTVNSSNYPGTITTPVIIPSSNHLYTPPKECEGRIYNRQQNIKNNIDREIKNTTSANSSN
DNIDKYVDEDMSDIENSPKADDLMSPNLRMNNFWPNADDLGTDHQANELNNIGTDDEIDC
KKDFNSKSLSIQLLRRKKKTRTVFSRNQVYRLESTFALKRYLSSSERVGLARTLQLTETQ
VKIWFQNRRNKWKRQVNVDYKSTNDSNSDDIISSRSTGIILPSSMIGTTKLQTSVTDFDP
SSTHISGSIGPTFSLNNFMNTSSAIESWVANNYIQSNVINPNYLQSINNNKNLLPPCSDN
YLSKNHIKLNSYPLNNINPHITSSSDNMHPTDLSISSWCHGNANVDVDVSSHSQKSSISP
LSSSLCAPATVTQASKDTTPISPFPIPLSSSLLSSDTYLSTGVNINSYSNPTFTESNTDN
RLSNLETILFNQTLNKNLGNIDSSDLSNLLEVHRRILKDDPDQSKIIAALNAVATNLLTR
II
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtgatagtataaatcatatcaaaagtatcaatgaaattaacaacaaatgt
tttatcaataataacgatagtcataacaatcaactagcaaattttatgaatttattaaat
tttcatagtcgtctatccactgaatattcaacatcgaactggtcaaatgaaatgcaacta
tacacagtgaatagttcaaactatcctggaactataacaacaccagtaataattccttct
tctaatcacttatacactccgccaaaagaatgtgaaggtcgtatatataatcgtcagcaa
aatattaagaacaatatcgatagagaaattaaaaatactacatccgctaatagtagcaat
gataatatcgacaaatatgttgatgaagatatgagtgatattgaaaatagtccaaaggca
gatgatcttatgtcacccaatttacgaatgaacaatttttggccaaatgcagatgactta
ggtactgatcatcaagcaaatgaattgaataacattggaacagatgatgaaatagattgt
aaaaaagattttaattcaaaatcattgtctattcagttattacgaagaaaaaagaaaaca
cgtactgtattttcaagaaatcaagtttatcgtttagaatcaacatttgctttgaaacgt
tatttatctagttctgaacgtgttggtttagcaagaacattacaactaactgaaactcaa
gttaaaatttggtttcaaaatcgtcgtaataaatggaaacgtcaagttaatgtcgactat
aagtcaacaaatgatagtaattcagatgatataatttcttcaagatcaactgggattatt
ttaccatcatcgatgataggaacaacaaaattacagacatctgtaaccgattttgatcca
tcatctactcatatttctggaagcattggaccaacgttttctttgaataattttatgaat
acatcatcagcgatcgaatcatgggtagctaacaattatattcagtcaaatgttataaat
cctaattatcttcaaagtattaataataataaaaacttgttaccaccatgcagtgataat
tacctttcaaagaatcacataaaactaaattcatatcctttgaataatattaacccacat
attacatcttcaagtgataatatgcatcctacagaccttagcatttcttcatggtgtcat
ggtaacgctaatgtagacgttgatgtatctagtcattcacagaagtcatccatttctcca
ttgtcatcttcattatgtgcaccagcaactgtgactcaagcgtctaaagatactactccc
atttctccttttcctattcctctctcttcttctttattatcatctgatacttatctgtca
acaggagtcaatatcaattcatactcaaatccaacgtttactgaatcaaacaccgataat
cgattgtctaacttagaaacaattctgtttaatcaaactttaaataaaaatcttggtaat
atcgattcatcagatttatcaaatctacttgaagtacatcgtcgaattttaaaagatgat
ccagatcaaagtaaaattattgcagcattaaatgcagttgctacaaatcttttaacacgt
attatataa
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