Schistosoma mansoni: Smp_015630
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Entry
Smp_015630 CDS
T01095
Name
(RefSeq) putative cys-loop ligand gated ion channel subunit
KO
K05195
glycine receptor alpha-3
Organism
smm
Schistosoma mansoni
Pathway
smm04080
Neuroactive ligand-receptor interaction
smm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
Smp_015630
04082 Neuroactive ligand signaling
Smp_015630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smm04040
]
Smp_015630
Ion channels [BR:
smm04040
]
Ligand-gated channels
Glycine
Smp_015630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF402
Motif
Other DBs
NCBI-GeneID:
8349313
NCBI-ProteinID:
XP_018654437
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All DBs
Position
W:complement(<21160112..>21162338)
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AA seq
422 aa
AA seq
DB search
MRDRIVNLIMSKYRSYERPPDGGNATIVTVNMKVLAIFSIDVRTMDYYIDLLLRQVWRDR
RLSWYDIPEYSQFNEPLVSPKLKEQLWLPDLFFRNGKDGYLHKLTLPNYLLRVHPNGNVL
YSQKITMRFSCQMHLQTFPMDNQHCHINIGSYGYTLNELKFVWNHNKPVELAEKLQLSEF
ETPKEFITNDCSSGYSTSTGQYTCLNATFELQRQLGSYLATTYIPNVLIIMVSWLSFWVN
VDSAPARVPLGLLSLLGILTQAISVSSTLPRVSYIKAIDIWMIFSIIFVIGVLVEYAIAL
TILRRKQCETWHEDVKEIVRDELTRWCTICQQQQLIQLQNSHHLNRGQLEFREELEYLLT
NQFIDNNTNTTNTTNNTTYNTTYNQNKEKLRPKRPPGLIESEIDTYSRFLFPAWKTILLF
NS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagatcgtattgttaatttaattatgtcaaaatatcgtagttatgaacgtccacca
gatggtggtaatgctactatagttactgtaaatatgaaagtattagctattttttctata
gatgtacgtacaatggattattatattgatttattattaagacaagtatggcgtgatcgt
cgtttatcatggtatgatatccctgaatattcacaatttaatgaaccattagtctctcct
aagctaaaagaacaattatggttacctgatttattttttcgtaatggtaaagatggttat
ttacataaattaactttacctaattacttgttacgtgtacatcctaatggtaatgtatta
tatagtcaaaaaataacaatgagattttcatgtcaaatgcatttacaaacattccctatg
gataatcaacattgtcatattaatattggtagttatggttatacattaaatgaattaaaa
tttgtatggaatcataataaaccagttgaattagctgaaaaattacagctgtcagaattc
gagactccaaaggaattcattacgaatgattgttcatcgggatattcaacatccactggt
caatatacatgtttaaatgcaacatttgaattacaaagacaattaggtagttatttagca
acaacatatataccaaatgtattaattattatggtatcatggttaagtttttgggtaaat
gtagattcagcaccagcacgtgtaccattaggtttattaagtttacttggtatattaact
caagctataagtgtatcatccacgttacctagagtatcatacatcaaagcaattgatata
tggatgatcttttcgattatttttgttataggagtattagttgaatatgctatagcatta
actatattaagacgtaaacaatgtgaaacatggcatgaagatgttaaagagattgttaga
gatgaattaacacgttggtgtactatatgtcaacaacaacaattaatacaattacaaaat
tcacatcatttaaatagaggacaattagaatttcgtgaagaattagaatatttattaacg
aatcaattcattgataataatacgaatactactaatactactaataatactacttataat
actacttataatcagaataaagagaaattaagacccaaacgtccccctggtttaattgaa
tcagaaattgatacatatagtagatttttatttccagcatggaaaacaattctattgttt
aactcttag
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