Schistosoma mansoni: Smp_017810
Help
Entry
Smp_017810 CDS
T01095
Name
(RefSeq) putative nipped-b-like protein (delangin) (scc2 homolog)
KO
K06672
cohesin loading factor subunit SCC2
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_017810
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
Smp_017810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT_2
HEAT
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
8350885
NCBI-ProteinID:
XP_018654847
LinkDB
All DBs
Position
W:complement(32143644..32182011)
Genome browser
AA seq
2594 aa
AA seq
DB search
MNGDISRIPIQSLSAVVSLTDIIPELPLPAPLHAGSSVETLLHDSRISIDAFQCLRFGHD
RLVGCLSEALGSVCTDNIDFKEGFASDIIDPHLLPEPLVSSLKKLPNFEQKRGFCGLSYE
SFNPVNSVSSAYKVQPGSWCSSLDQPPSTEHHHYSNSLEEPIESPSKKKKKRKKKKHKYC
DDGDTSGTGGESNATTPAAYGGTTPNKLEDNSLSPTSTYGIVKVNADTKKLSLKIFKRPA
NDGSQPVFMVEQLGGVEPVKKEKKKKRNREKDREHRSHHEVRSKLDSHSSPVEIHVQQNE
LSIDLPIQTRNTPSNSPLSTVTPNENCKGSELIPSTFTESCQLSMKDPSQLDLSLIASEG
LFENLNSMNNLYQQPQSVSTSSLPSTPASMSGNGMVVTSSNCAPTCTYSFDTNQTNVFTT
KSNMFYELLRGNDPNMTLKHVADGLPSDFVASNSSACTVVPNTLGSVCNMMDFASNFLQN
EMLSSNSCINFPLGTASLATCDSSTVQRTGFPVQPSSTTTSFLVASHLIDSSHSSVVTAA
DSTFDVLGGILNSSGYASVTDVSPAAFAANFDMSGLPPDSSTHHVPMGLASYLSAPNQIT
NTQILNDYRTQNQPARTDSNLLSTITSTPQPWWKRKSNSVLRRRKRRKNELEDLQSWTVN
YPVSGPGLSKSASERTKGPDERTWDDAIGSYSQVLGERVKRRKRMVRQGGNFDSDFHVSR
IYVKQENLRVNDVNAEQSVGGETGSVKRFLNKLSTVLESIEETDFLRSLGGVPNSDDQLR
KSNCEDVISYLDKESLSTETIISSEDLAEFCRDAAKLNSIGVANQIPTGQLLNFLTLLLL
NIRDGANVIAVLRPEEEADAHESKLWKEVAMERVMRSMNSGLTALLLMTSKDMPREVYVE
DVIERTVYSVRFQLFNCIFPEFDPAYRVENTAKENQSSIKSRRARERDAQKPKSIIHLYH
KLVEIVSNLSKLVKIQRLTDSLVLTLSSVGVSVFFVENVSELQLAALELVTAIFAQYETH
RKLIMEEILASLSRLPSSKKNLRSYRLNSEDSIQMLTALALLLVQSVISLPDPSPLNSEQ
NTNVFYQSSNVSVSTDGGLVQKADDEVTIINSYHNALRTAHTFLLVFLRKSTMKGEDDYR
IIFENFVNDLLLAVNKPEWPASEVMLSLLGSLLVQQFNNKALDQSVRVASVDYLGTVAST
LRRDAVTSQLKEHDIDAVIRDLLDGNQSDEDEEDSEEELQDLDTKTDDTKEINGDRESSS
EVDRNKSESDIHSVGSASTTETPIRHNENGYSSTNTKSVAKVIDTKIPKDKVIKSKRSGH
KDKYTDPISQLDRVQALRDAILDYLAAEEASPTAVYARKFYLAQWLNDCTKETERAQRSA
VQKKNQNAVLNGNGETVCATKGFSEADQALILAVAERRRQHILSKVREAPQSWRQRRCLW
SNSLPSNEKTKQSANICISDSNQETTLIFQGTLDYEDCCLVCRYLASLRPFSQSFDVYLS
QICRLLSESSVAVRTKALRCLSAVVEADPNVLARVDIERAVHSRLLDTSTSVREAAVDLL
GRFLSCRPELTAQYYPMLAERIRDKGVSVRKRVIRILRDICLEQPDFPRVAEICVKMIRR
VNDEEGIKKLVHEVFQAMWFTPVRERETVKLLRKVMNITDVVGACKDTGYEWFEQFLRTL
LKKEETEKVKPVEKACKQIADCLVQNIMRLEEISSQSNQRLVACLATLHLLTKIRPELMV
QYTMVLQPYLSIRCNEASDAHVLHYVARILEATLPLMEHPSETLVAQLEEDMVRLTLRHG
KMVLESCVACLGAVVNRVSKNYSLARDCFTRFFNALQKFRNELSDDSERKISPTIRPSIL
RALFTVGLLCKHFDADVFRSSKNANIRDQVFETLMFFTEQVKSDIEMRKKALSGLGFLCT
RHHELLCGPRLCKFYHDLLQAPCDEAKPKPSDHHLELKCIVLENLLNFFLEEEKRMLEAD
AKWKASQHQESLKEMGDIASGMGSSVAQMYLKDILESFFSPFFTVRLTALSVITTILRQG
LVHPVQTVPYLIAMQSDIDPNIRIKADAQLQEIDTKFPGFLTMRAAQGVNLSYRLQLVLY
NELREKLKGNSEGEVPSAMNSHLYSMLRNNKSQRRSLLNGLISLFDDSQKIPLSQLVYVA
DNLAHFPYQSQEEPLFVVHHIDLMVSMAGSGVLKNVREALFPELKAALEAVVAAQLETDA
KNRAQMELQLSAELQAQQVASADAMSRGDHETAGLLADQIQHTIQRINSLNSSNPSIMSS
NASLSEFPSGALIGTEGVSRVDLGPFEIEEEEDPIALFDRLSKTRQTSLAIVRDAMRTSR
ACVLLLTLKQFLKESYCITDGKIQRYSPSDSAKLWEKPLTRRVGVHFHPIPCLKAAGMEI
NKSDSHILCNSQSSVRTDNSSVELSNPNDKQADSGEEMINEMQSLIRDYLDFRKLILTID
PPGEEELGPDDLNTSVQSGGPTNDDRLNTVSDSTQLSKGRSVRTLVPQLHSKSSEDDNDS
EDSNAGGASRLMLAQSAPTKKRKPALNLRGNLKNPLARNTKNKRKRRKRCIMAASSSGEE
SDSADESEPSDPDY
NT seq
7785 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgatatttctcgcatccccattcagtctctgagtgccgtagttagtctaaca
gatataattcctgaactcccgttacctgctccactacatgctggatccagtgtggaaact
ttgttgcatgattctagaatatcaatagatgcctttcagtgtcttcgttttggtcatgac
cgactcgtgggctgtctcagtgaagcccttgggagtgtatgtactgataacatagatttc
aaggaggggtttgctagtgacataattgatccccatttactacctgagccccttgtcagc
tctttgaaaaagctaccaaattttgaacaaaaacgaggattttgtggtctttcttatgaa
tctttcaatccagttaatagtgtttctagtgcgtataaagtacaacctggttcatggtgt
tcatctctggatcaaccaccatctactgaacatcatcattattcaaattcattggaagaa
ccaatcgaatctcccagtaagaaaaagaaaaagcggaaaaagaaaaaacacaagtactgt
gatgatggtgatacaagtggaacaggaggcgaatcaaatgccaccactccagcagcctat
ggtggtacaactccaaataaacttgaggataattcattgtctcccacttcaacatatggt
attgtaaaagtcaacgcagatactaaaaaactttcattaaaaattttcaaacgacccgcg
aacgatggctctcagcctgtttttatggttgagcaactaggtggtgttgagccggttaaa
aaagagaaaaaaaagaagcggaatagagaaaaggatcgtgagcatcgatctcatcacgaa
gttcgatcaaagttggattctcactcttccccagtggaaattcacgttcaacaaaatgag
ttatctattgatctaccaatacaaacacgtaatactccttcaaatagccccttaagtacg
gtaacacctaatgaaaactgtaaaggctccgaacttatcccttcgacttttactgagagt
tgtcagttatccatgaaagatccttcccagcttgacctatcgctcatagcaagcgaaggt
ttatttgaaaacttgaattcaatgaataatttgtatcaacaaccacagtctgtatctaca
tccagtcttcccagtactccagcttcaatgtctggtaacggaatggtagtgacctcaagt
aattgtgctcctacatgtacgtatagttttgatactaaccaaacaaatgtattcacaact
aaatcaaatatgttctatgagttattgcgtggtaatgatcctaatatgaccctgaagcat
gtggcagacggtttacctagtgattttgtagcatctaattcatctgcttgtacagtcgtc
cctaataccttgggctctgtatgcaacatgatggactttgcctctaatttccttcaaaat
gaaatgctttcgtccaattcttgtattaattttccacttggaactgcttctctagctact
tgtgatagctccactgtccaaaggactggctttcctgtacaaccatctagtaccactact
tcttttttggttgcttctcatttgatcgattctagtcattcgtctgttgttactgctgca
gactccacgtttgatgttttgggcggtatactcaattcttctggttatgcatctgtcaca
gacgttagtcctgctgcatttgctgctaatttcgacatgtctggcttgcctccagattcc
agtactcaccatgtccctatggggctcgctagttatttatctgctcctaatcaaattact
aacactcaaattctcaatgactatcgtacccagaatcaacctgctcgtactgactcgaat
ttgttatcaacaattacaagtactcctcaaccgtggtggaaacgaaagagcaattctgtg
ttaagaagacgcaaacgccggaaaaacgaacttgaagatttgcagtcttggacagtcaat
tatccggttagtgggcccggtttatcaaaatccgcctctgaacgcaccaaaggtcctgat
gaacggacctgggatgatgcaatcggttcttatagccaggttcttggtgaacgtgttaaa
agacgaaaacgaatggttagacagggtgggaatttcgattcagactttcacgtttcccgc
atatacgtaaagcaggagaatctacgcgtaaacgacgtgaacgcggaacaaagtgttgga
ggtgaaacgggaagtgtaaaacgatttctcaacaagttgtcaactgttctcgaatctatt
gaggaaacagactttttgagaagccttggtggcgtaccgaacagtgatgatcaactacga
aaatctaattgtgaagatgtgatttcatatcttgataaagaaagcttatcaactgagact
ataatatcgtctgaagacttggcagaattttgtcgtgatgctgctaaattaaactcaata
ggtgttgctaatcaaattcctactggtcaattactcaacttccttacattgttgttgctc
aacatacgagatggtgcgaatgtgattgccgtattaagacctgaagaagaagctgacgca
catgaaagcaaactgtggaaagaggtggcaatggagcgagtaatgcggagtatgaattcc
ggtctaactgcgttattattaatgacttcgaaggatatgcctagagaagtttatgttgaa
gatgttatagagcgtacagtgtatagtgtcagatttcaattattcaattgcattttcccg
gaattcgatcctgcctatcgtgttgaaaatacagctaaagaaaatcaaagcagtataaaa
tctagacgtgctcgtgaacgcgatgctcaaaaaccaaagtccataattcatctgtaccac
aagctagtggaaattgtttctaatttatctaagttggtaaaaatccaaaggctgacagac
agcttggtccttaccttatctagtgttggtgtctccgtattctttgttgaaaatgttagt
gagttgcaacttgctgctttggaacttgtcactgctatattcgcccaatatgaaactcat
aggaagctaataatggaggaaatactggctagcttatcccgtcttccatcaagcaaaaag
aatctacgttcttatcgattgaatagtgaagatagcattcaaatgcttacagcattagca
cttttgttggttcagtcggttataagtcttcctgacccatcacctctcaactcagaacaa
aatactaatgttttctatcagagctcaaatgtctctgtctccactgatggaggattagtt
caaaaagcagatgatgaagtgacaattattaattcttatcataatgctcttcgtacagcc
catacttttctgttggttttcctacgcaaatcaacaatgaagggcgaagatgattaccga
attatttttgaaaacttcgtaaatgaccttctcttagctgttaacaaaccggagtggcca
gcatcagaggttatgcttagtcttcttggtagtttgttagtacagcagttcaataacaaa
gcacttgatcaaagtgttcgggttgctagtgtcgattacttgggaacagttgcatctaca
ttacgtcgtgacgcagtaactagccaattgaaggaacatgatattgatgctgtcatccgt
gatctattggatggtaatcagtcagatgaagatgaagaagattctgaagaagagttacaa
gatttagatacaaaaactgatgacacaaaagaaataaatggcgatcgtgaatctagctca
gaagtagataggaataaatcagagtctgatattcattcagttggttctgcttccactact
gaaacaccaatacgccataatgagaatggttatagttcgacaaacacaaaatctgtagcc
aaagtaattgataccaaaattcctaaagacaaagtcatcaaaagtaaaaggtcaggacac
aaagacaaatatacggatcccatttctcagttggatcgagtccaggcactgcgtgacgct
attttagactatcttgcagcagaagaggcgagtcctacggcagtttatgctcgtaaattt
tacctggctcagtggcttaatgattgtacaaaggaaacagaacgtgctcaacgaagtgca
gtacagaagaaaaaccagaatgctgttttaaatggcaatggtgaaactgtatgtgctacc
aaaggtttttctgaggcagatcaggcgctaatcctagcggtagcggaaagaagaagacag
cacattttgtcgaaagtacgtgaagctccacagtcttggcgacaacgtagatgtttatgg
agcaattcattgccttctaatgagaaaacaaaacagtctgcaaacatctgtatttctgat
tcaaatcaggaaacgacgctcattttccagggtactttagactatgaagattgctgctta
gtttgtcgttatctagccagtctccgaccattttctcaaagttttgacgtttatttatcc
caaatatgtagattattgagtgaatcgtcggttgctgtgcgtactaaagcgttaagatgt
ttatcagcagtggtggaggctgacccaaatgttctagctcgcgtagatattgagcgggct
gtacattctcgtcttctagatacatcgacttcagttcgtgaagctgctgtagatctactt
ggtcgatttttaagttgcagaccagagctgactgcacagtattatccaatgttggccgaa
cgaatacgagataagggagtaagtgtccgcaaacgcgttattcggatccttcgtgacatt
tgtcttgagcaaccagactttccaagagttgctgaaatttgtgtaaaaatgattagacgt
gttaacgatgaagaaggaatcaagaaacttgttcatgaggtctttcaggcaatgtggttt
actcctgtacgtgaaagagaaacagtgaagctacttcgaaaggtcatgaatatcacagat
gtcgttggagcttgcaaagacacaggttatgagtggtttgaacaatttttacgtactctt
ttaaagaaagaagaaacggaaaaagtcaaaccagttgaaaaagcatgcaaacaaatagct
gattgtttggttcaaaatattatgcgattagaagaaatttcaagtcaaagcaatcagaga
ttggtagcgtgtttggcaacacttcatttattaacaaaaatcagaccggaattaatggtt
cagtatacaatggtattacaaccctatttgtccattcgttgtaatgaagcatcagatgcc
catgtgttacattatgttgctagaattctagaagccacgttgccattaatggaacatcct
agtgagacactagttgcacaacttgaagaggatatggttcgtcttactctgcgacatgga
aaaatggtacttgagtcatgtgttgcgtgtttaggtgcagttgtcaatcgtgtttcgaaa
aactattctctagctagagattgtttcactcggtttttcaatgctcttcagaaatttcgc
aatgagctgtccgatgattctgaacgcaaaatatccccaactattcgcccttctattctt
cgagctctatttactgtaggtttgctttgcaagcattttgatgcagatgtatttcgatca
agtaaaaatgcgaatattcgtgatcaggtatttgaaacacttatgtttttcacagaacaa
gttaaatcagacatcgaaatgcgtaagaaagcattatcaggattaggttttttgtgtact
cgtcatcatgaactactttgtggtcctcgtctttgtaaattctatcatgatcttttgcaa
gctccttgtgatgaggcgaaacctaaaccatccgaccatcatttagaattgaagtgtatt
gtgctggaaaatttgttaaacttttttcttgaggaagagaaacgcatgttagaagccgat
gcaaagtggaaggctagtcaacatcaagaatcattaaaagaaatgggcgatattgcttca
ggtatgggtagttcagttgctcaaatgtatctcaaagatatactggaatcatttttttct
ccattttttacggtgagactcactgccctctctgtcataactacgattctccgtcaaggt
cttgttcatccagttcaaactgtaccctacttgatagctatgcagtccgatattgatccg
aatattcgtattaaagctgatgctcaactccaggaaatagacaccaaattcccaggtttt
ctgacaatgcgagctgcacaaggtgtcaacttatcttatcgccttcagcttgttttatat
aatgagttacgtgaaaagctaaagggtaattctgaaggtgaagttccttctgctatgaat
tcgcatctatattctatgcttagaaacaacaaaagtcaacgccgttctctacttaatggc
ctaatatcattattcgatgactcacagaagattcctctcagtcagttagtatatgttgct
gataatctggctcattttccttatcaatcgcaagaggaacctctatttgtcgtgcatcat
atagacttgatggttagtatggctggttcgggagttttaaaaaatgttcgtgaggcactt
tttccagaactaaaagcagctctagaggctgttgttgctgcccaacttgagacagatgca
aaaaaccgtgcacaaatggagctgcaattgagtgctgaacttcaggcccaacaagttgcc
tcggctgatgctatgagtagaggtgatcatgaaacagctggattacttgccgatcaaatt
caacatactattcaaagaataaacagtttgaattcctccaatccttctattatgtccagt
aacgcatctctatctgaattcccttctggggctctcattggaacagagggtgtctcccga
gttgatttaggtcctttcgaaatagaagaggaggaggatccgattgcattatttgataga
ctgtctaagactcgccaaacatctttagcaatagttcgcgacgcaatgcgtaccagtcgc
gcttgtgttttattgctaacactcaagcaatttctaaaagaatcttattgcatcactgac
ggtaaaatccaacgttactcaccttctgattcagccaaattatgggagaagccgttaaca
cgacgtgtcggtgttcattttcatccaataccttgtttaaaagctgccggaatggagatt
aataaatctgattctcatatcctatgcaattctcaatcatcagttagaacagataatagt
agtgtggagttatccaatcctaatgacaagcaagcagatagtggagaagaaatgataaat
gaaatgcaatctctcatccgagattacttagacttccgaaagttaattcttaccattgat
cctccgggagaagaagaactgggacctgatgacttgaatacttcagtacagtccggtggg
cctactaatgatgatcgattaaatacagtttcagatagtacacagttgagtaaaggtcga
tccgtaagaacgttagtaccacaattgcacagtaaatcttcggaagatgacaatgattca
gaagattcaaatgcaggtggtgcttctcgacttatgttggcacaatcagctcctacaaag
aaacggaaaccagccctcaatctacgtggtaatttgaaaaatcctctagctcgaaatacc
aagaataagcgcaaacgtcgaaaacgatgcataatggcggccagttctagtggggaagaa
agtgattcagcagacgaatctgaaccatctgatccagattactaa
DBGET
integrated database retrieval system
