Schistosoma mansoni: Smp_017890
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Entry
Smp_017890 CDS
T01095
Name
(RefSeq) family C19 non-peptidase homologue (C19 family)
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
smm
Schistosoma mansoni
Pathway
smm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Smp_017890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_017890
Spliceosome [BR:
smm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
Smp_017890
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Ortholog
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
DUF674
Motif
Other DBs
NCBI-GeneID:
8350898
NCBI-ProteinID:
XP_018654857
UniProt:
G4VNY2
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Position
W:complement(32529508..32536951)
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AA seq
577 aa
AA seq
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MSSLSFLPHSVSSVSGHKRKHEKAHKKSSKRIKRSEESDEEQVYTGNGAVYNDQNEDTRS
RSCPYLDTIRRNMLDFDFEKLCSVSLSHLNVYACLICGKYFQGRGNSTHAYTHSVSESHH
VFLNLETRRFYCLPDDYEILDGSLEDITYLLNPTFSTSEILTLDSYSKMVRAYNGLTYYP
GVVGLNNIKANDYCNVILQMLSHISPLRNYFLDIKNFENLPSVSGDQMMLLVQRFSELIR
KLWNPRNFKTHVSPHEFLQAVVLCSKKRFQITEQGDAIEFLSWLVNAIDKALRTKKIPCP
KGAVNKTYKSIVSSTLRGKMRMYSRKIMPVNMTDEEKASLADSPEYMTTVSDINFFYLTC
DLPPPPLYLDEFKENIIPQVSLATLLSKFNGVTEKEYKTHRDSTLRRFELRRLPPYLILY
MKRFVKNIFTLEKNPTIVNFPIKSIDFGELLAPEFRAKHRYTTYDLVANVVHDGPPTPGS
GTHRIHLVHRGTGKWFELQDLHVSEVLPQMIPLSETLIQVWAVNKSIPNPSFVEPVKVTD
EEIDGETKPEFKTDENDECEAIRKEETMDTDINESQN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactatcgtttctacctcattcagtttcttcagtttctggacacaaaaggaag
catgaaaaagcccataaaaaatcctcaaaaaggatcaagcgtagtgaagagtcagatgaa
gagcaggtgtatactgggaatggagccgtttacaatgatcaaaatgaagacaccagaagt
cgatcatgcccatacctggatactattcgaaggaacatgctggatttcgacttcgaaaag
ctgtgttccgtttctttatctcacctgaatgtctatgcctgtctaatctgtgggaagtac
tttcaaggtcgtggaaattctactcatgcatatacccacagtgttagtgaaagccaccac
gtcttcctgaatttagaaactcgacgattttattgcttgccagatgattatgagatttta
gatgggtcattggaagacattacctaccttctaaatcctactttcagtacctccgaaata
cttactttggacagttattcgaaaatggtcagagcatacaatggtcttacatattatcct
ggcgttgtaggtctcaataatatcaaggcaaatgattattgcaacgtcatattacaaatg
ctcagtcatatcagtccattgcgaaattatttcttggatatcaaaaactttgagaaccta
ccttctgtctctggagatcaaatgatgcttttggttcagagatttagtgaacttattcga
aaattgtggaatcctcgaaacttcaaaactcacgtttcacctcatgaattcttacaggca
gttgtgctgtgtagtaaaaagcgtttccaaatcactgaacaaggcgatgccattgaattc
ctttcatggttggttaatgcaatagataaagccctaaggactaaaaaaattccctgtccc
aaaggcgcagttaataaaacctataaaagcatagtttcatcaactttacgaggaaagatg
agaatgtacagtcgaaaaatcatgcctgtgaacatgacggatgaagaaaaggcttctcta
gctgacagccctgaatacatgactacagtatcagacataaatttcttctatcttacgtgt
gacttacctccacctccattatatctagatgaatttaaggaaaatatcattccacaagtt
tcattagctacacttctttcaaaatttaacggagttacagaaaaggaatacaagactcat
cgtgattctacgttgcgtcgatttgagcttcgtcgacttcctccttacttaattctttac
atgaagaggtttgttaagaacatcttcacattggagaaaaatccaacgatagttaacttc
cccattaaaagtattgatttcggtgaattgttggccccagaattccgagctaaacatcgg
tatactacttacgacttggtagccaatgttgtgcatgacggtcccccaactcctggctcc
ggtacgcatcgtatccacttggtacatcgcggtactggaaaatggttcgagctacaagac
ttgcatgttagcgaagttttgccacagatgataccccttagtgaaactcttattcaggtt
tgggctgtgaataagtctatacctaatccaagcttcgtagaacctgtaaaagtaacagat
gaggagattgatggagaaactaaaccagaatttaaaacggatgagaacgatgagtgtgag
gcaattaggaaggaagagactatggatacagatattaatgagtcacaaaactga
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