Schistosoma mansoni: Smp_022310
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Entry
Smp_022310 CDS
T01095
Name
(RefSeq) putative helicase swr1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_022310
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Smp_022310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
PSCyt2
Motif
Other DBs
NCBI-GeneID:
8343506
NCBI-ProteinID:
XP_018653884
LinkDB
All DBs
Position
W:6331810..6358748
Genome browser
AA seq
1098 aa
AA seq
DB search
MTDDYPDAVSSENRITKADDERDVKGSTVVSERMVSVIEAPDYLASFNIDTGGEAEGSSM
PHYIVNLNMYNTNTDMDALTTLPIHGQDPDIGESSVSLPTSDMNSPVIMNDNVGLMCGVS
STGRGQQFFTPTMRSKARGRGRFSSVPLDDVMEKKIRTYEGKDCVQELGKLLKLFPRFKR
AYINRVFTRNMLSYEKSYEQLKEEDDRERERCSKVRLIQAPKAESKRPTDSKTHNRPELP
LQSQAFLCMGLPLGRCPPHVANSLYRRVIVTPEGTVESADEHEQKFLDSTGLSSSALETP
SSHCEPPRPKPSLFTGXXXXXXXXXXXXXXMRTATVSTPVSRPIITASAVRSDLDSDDSS
RKPGDAVKYLAKVGVVSNLVSRKRPTRRGKSTRQKLTTEIQEVNNETSTSPAVEVITEDD
CERLTEQVASHATRLLENTIDLPANAITDQNQSDGVDHEHDDFSINKTNGNPVQLVTQQP
AILNPLRELKPYQLVGLNWLRLLHHEQVNGILADEMGLGKTVQAIAFLASLWESGNRGPH
LIICPSSTQDNWQRELSLWCPHLKVLVYQGSAEQRKAIRLKIYESESQPDFNILLTSYAV
GTSAIEDRALMKRINFHYGIFDEAHMLKNMTSQRYRNLMNFRVQRRLLLTGTPLQNNLLE
LVSLLSFVMPEMFLKSTDLLKRIFQIYSKPMNSREEDQSANNSPIRSSFEEERLVQAKSL
LQPFCLRRLKSQVLGQLPPKTSEVVLVAMTKTQATHYHDLVKRLLTSKSISESLQSPCNM
VTALRKAANHQALFSGLAYTDSNLRDIAESLHLDPSHSNADPNLIYEDLLAMSDHQIHKL
CQFYETLSSYTLSPESIISGSGKIQWLNDNLPKLVSEGHRILIFSQFVIMLDILEEFLRI
TNRRYIRMDGSTPVSERQTLIDRFNSSSIEVFLLSTRAGGLGINLTGADTVIIHDIDFNP
YNDRQAEDRCHRLGQKNPVHVIRLISEGTLEEGMLRIASEKLQMEQNVTGCVSEYNTEQT
EESEDTTRVSSRSRRSKSTNILPPSSLDGMTENGNVFKVLGNWNSAASDLSLSIVNPISS
NRISERDVRSLLSDALKL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgattatcctgatgctgtgagttctgaaaaccggattacgaaagctgatgac
gagcgagatgttaaaggcagcactgtagtgtcagaaaggatggtgtctgttattgaagct
ccagactatttggctagcttcaatatcgatacgggtggcgaagcagaagggtccagtatg
cctcattacatagtcaatttaaatatgtataacacaaacactgatatggacgctctaact
acactaccaattcatggtcaagatcctgatatcggtgaatcatctgtctcacttccgact
tctgacatgaattcacccgtcattatgaacgacaacgttggtttgatgtgtggtgttagt
tctacagggcgaggacagcagtttttcacaccaactatgcgttctaaagcacgtggtcgt
ggacgattttcttctgttcctttggatgatgtaatggaaaagaaaataaggacatatgag
ggaaaggattgtgtgcaagagctaggaaagttgttaaaattattcccccgctttaagagg
gcctacattaatcgagttttcacacggaatatgcttagttatgaaaagagttatgaacag
ttaaaggaagaagatgatcgagagcgtgaaagatgctcaaaggtccgtctcattcaggca
ccaaaggctgagtctaaacgaccaacagattcgaaaactcacaatcgtccggaattgcct
cttcagtcacaagctttcttatgtatgggactgcctctgggtcgttgccctccccatgtt
gctaactcactgtatcgtcgagttattgttactcctgagggaaccgttgaatctgccgat
gaacatgaacagaagtttttggactctacgggtttatcaagttctgcactggaaacacca
tcctcacactgtgaaccaccgcgtcccaaaccatcattgtttactgggnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatgcgaactgccacagttagtacacccgtt
agtcgacctatcattacagcatcagcggtcagatctgatttggatagtgatgattctagt
aggaagccaggagatgctgttaaatatctagctaaagttggtgttgtaagtaatttagtt
agtcgtaaacgacctacacgtcgtggaaaatcaactcgtcaaaaattaacaacagaaatt
caggaagtcaataacgaaacaagcacttcacctgctgtcgaggttattacggaagacgat
tgtgaacgtctaactgaacaagttgctagtcacgcgacacgtttgcttgaaaatactata
gatttacctgcgaatgctatcactgatcaaaatcaatctgatggagttgatcatgaacat
gatgacttcagcataaacaaaacaaatggtaatcccgtccaactagtgactcaacagccc
gctattttaaaccctttgcgtgaattaaaaccctaccaacttgttggtttgaactggctt
cgtctactacaccacgaacaagtcaatggaatactagcagatgaaatgggcctcggaaaa
acagttcaagctattgctttcttagctagcctttgggaaagtgggaatcgcggaccacat
cttatcatttgtccaagttcaacccaggataattggcagcgtgaattaagtctttggtgt
cctcacttaaaagtacttgtttatcaaggatctgcagaacagcgaaaggcaatccgattg
aaaatttacgaatctgagtctcagccggattttaatatactattaactagctatgctgtt
ggtacaagtgctattgaagacagagctttaatgaaacgcatcaacttccattatgggatt
ttcgatgaagcacacatgctaaaaaatatgacttctcaacgttatcgaaatctgatgaat
tttagagttcaacgacgtttacttcttacaggtacacctcttcaaaacaacttgttggag
cttgtgtctctgttatcatttgttatgccagaaatgttcctgaaaagcacagatctgctg
aaaaggatttttcagatttactcaaaacccatgaattcccgtgaggaagatcagtcagcc
aataacagtcccattcgaagcagttttgaagaagaacgcttagttcaagctaaaagtcta
cttcaaccattttgtttacgacggttaaaatcacaagtccttggacagcttcctccaaaa
accagtgaagtggttttagtagcaatgacgaagacacaagcaactcactaccacgatctt
gttaaacggctactcacttccaaatccatttctgagtctctccagtcaccgtgcaacatg
gttacggcgttgcgcaaggcagcaaatcaccaggcccttttttctggtctcgcatacaca
gactcaaaccttcgggatattgcagaatctttgcacttagatccaagtcactctaatgct
gatcccaatcttatctatgaagacctacttgcaatgagtgatcatcagatacataaactt
tgccagttttacgagactttatcatcatatactctctcccctgaatctatcatttctgga
tctggaaaaatccaatggttaaatgacaatttgcctaaattagtctccgaaggacatcgt
attttgatttttagtcagtttgtcatcatgttagatatattagaggaatttttaaggata
actaacaggcgttatatacgaatggatggatcaactcctgtctcggaacgacaaacatta
atagatcgtttcaacagctcatcgattgaggtttttcttctatctacacgagctggtggc
ctaggtattaatttaactggtgcagatactgtaattatacatgatattgatttcaatcca
tataatgatcgacaagcagaagatcgttgtcatcgacttggtcagaaaaatcctgttcac
gtcatacgactaatctctgaaggtactttagaagagggtatgctgcgtattgcatctgag
aaattacaaatggaacagaatgtaacaggttgtgtatctgaatacaacacagaacagacc
gaggaatctgaagacactactcgtgttagttcccggagtagaagatcaaagtcaactaat
attttaccaccttccagtctagatggtatgacagaaaatggaaacgttttcaaagtcctt
ggtaattggaactcagctgcatcggatctcagtttatccattgtgaatcctatatcgtcg
aatcgaattagtgaacgagatgttcgctcccttctttcagatgctttaaaattgtag
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