Schistosoma mansoni: Smp_022660
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Entry
Smp_022660 CDS
T01095
Name
(RefSeq) putative wd-repeat protein
KO
K14848
ribosome assembly protein RRB1
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_022660
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Smp_022660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
CAF1C_H4-bd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Treacle
Motif
Other DBs
NCBI-GeneID:
8345106
NCBI-ProteinID:
XP_018649758
UniProt:
G4VEB8
LinkDB
All DBs
Position
2:complement(5513671..5528546)
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AA seq
485 aa
AA seq
DB search
MSDKWSEKSVEGYRNGNQGCEKPTTEENNELMEVDGSEFKNEVYILGRSRPLEDDEELVM
DKRAYRMFFELEVEFPSLSFDILTDNLGFDRCVEVNGEAHSVCLISGTEAPKDNQNKLIV
MRLSNMLPFRRKNPTEDTDSDSEDESDSEEDLDAEPDVEAATILHQGTVNRVRASQHRGR
YLAASWSENGLVFIWDLTRPLTAVNDSAVMADYVRHNESPSPLFTFNGHNSEGFALDWGI
HTNSSGHLATGDCNGRIYHWIPRSSDWAVSKRAYLGHTDSVEDIQWSPTEPTVFISVSSD
HSIRVWDVRAPISSGSMLTVSEAHPADINVASWNKLQALNFLTGGDDGTLRIWDLRLVHS
CYSDKKSNNGSLPAYTHLFDYHKKPITSVEWHPNDAGMFVATCEDDQATFWDISLEQSER
EVKQSNESSSNHEADEEEDLGIPVQMLFVHGGQTELKEAHWHPQIPGLVFTTALNGYNVF
RTCNI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagtggagtgagaagtctgtagagggctatcgtaatggaaaccaaggttgc
gaaaagccgacgacagaggaaaataatgaattaatggaagtagatgggtccgaattcaaa
aatgaggtttacattctgggccggtctcgtccacttgaggatgacgaagagctagttatg
gataaaagggcttatagaatgtttttcgaattagaagtagagtttccaagtctcagtttt
gatattctaacggataaccttggttttgatcgctgtgttgaggttaatggtgaggctcac
agtgtttgcctcatatcgggtacagaagcaccgaaagataaccaaaacaaacttatagtc
atgcgtctatcaaatatgttgccgttcagaagaaagaatcctactgaagacacggattct
gattcagaggacgaaagtgattctgaagaagatcttgatgcggaacctgatgttgaggct
gctactatcctacatcaaggtacagtcaatcgagtccgggccagtcaacataggggtcga
taccttgctgcatcctggtcagaaaatggattggtattcatatgggatttaaccagaccc
cttacggctgtaaatgattctgctgtcatggctgattatgtacgtcataatgaatctcct
tcacctttattcacatttaatggtcataattcagaaggctttgctttggactggggtatt
catactaattcttctggacatttagctacaggagattgtaatggtcgtatttatcactgg
atacctcgatcgtccgactgggctgtatcaaaaagagcctatttaggtcatacagattca
gtcgaagatattcagtggtctcctacggaacccactgtatttatctctgtttcttcggat
catagcattcgcgtctgggatgttcgcgcaccaatatcgagtggcagcatgcttacagtt
tcagaagcccatccagctgatataaatgttgcttcttggaataagttgcaagctcttaat
tttctaacggggggagatgatggaactttaagaatatgggatttacgattagttcacagt
tgttacagtgacaaaaagtcgaacaatggatctctacctgcttatacgcacttatttgat
taccacaagaaaccaatcacatcagtagaatggcatccaaacgacgctggaatgtttgta
gctacatgtgaagacgatcaagctacattctgggacattagtttagaacaatctgaacga
gaagtaaaacagtcaaatgaatcaagttcaaatcatgaggcagatgaagaagaggattta
ggcataccagtccaaatgttatttgttcatggtggtcaaacagagctaaaggaagcacac
tggcatccgcagataccaggactagtatttacaacagcattaaatggctacaatgttttc
cgtacttgtaatatctaa
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