KEGG   Schistosoma mansoni: Smp_025100
Entry
Smp_025100        CDS       T01095                                 
Name
(RefSeq) U5 snrnp-specific protein-related
  KO
K12857  Prp8 binding protein
Organism
smm  Schistosoma mansoni
Pathway
smm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Smp_025100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smm03041]
    Smp_025100
Spliceosome [BR:smm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    Smp_025100
 Complex C
   U5 SnRNP specific factors
    Smp_025100
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 NBCH_WD40 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Ge1_WD40 Beta-prop_WDR19_1st PEP5_VPS11_N WD_LRWD1 Beta-prop_Vps41 KNTC1_N Beta-prop_Nup120_160 eIF2A Beta-prop_NWD2_C Beta-prop_HPS5
Other DBs
NCBI-GeneID: 8352409
NCBI-ProteinID: XP_018654981
UniProt: G4VPH0
LinkDB
Position
W:36513174..36522795
AA seq 367 aa
MDFKKPLAGVTSMSMVPLPSKKPRKDGSSLGITPFSNGMYKLNSQIIPAGQAGSIPRTSN
LLSPNMLLNGHESEVYCGKFSSDGSFLASAGFDRRILLWETYGECENIATMMGHGGAILD
LVLSSDDSVIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCAVARRGPQHVCSGSDDG
TIRLWDRRQKACVQTFQNTYQVLSVTFSDTSEMIFSGGIDNVVKGWDLRKLEASMLLSGH
TDTVTGLSVSPDGSFLLSNSMDNTLRMWDIRPFAPADRCTKIFTGHQHTFEKNLLRCAWS
IDNRRITSGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLG
EILPCMY
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggacttcaaaaaacctttggctggggtaacctcaatgtcgatggttcctttgcctagc
aagaaacctcgaaaagatggttcaagcttgggaatcaccccatttagcaatgggatgtac
aagttaaattcgcagatcataccagcaggacaagcgggaagcattccccgtacatcgaat
ttactgtcacctaatatgcttttaaatggtcatgaaagtgaggtgtattgtggcaaattt
tcttctgatggatcgtttctcgcaagtgctggatttgatcgccgaattctattatgggag
acgtatggtgaatgcgaaaatattgcgacgatgatgggtcatgggggtgctattttggat
ttagtgctttcttcagatgattcggttatatatactgccagttcagataaatctatcgcc
ttatgggatactgaaagtgcacaacgcattaaaaaattcagaggtcatgaaaacattgtt
aattcatgtgcagttgccagacgtggtcctcaacatgtgtgttccggttcggacgatggg
acgattcgtctgtgggaccggcgacaaaaagcctgtgtacaaacattccaaaacacatat
caggttctttcagttacttttagtgatacttctgaaatgatattttctgggggcatagac
aatgttgtgaaaggttgggatttacgaaaattggaagctagcatgctacttagtggacat
acggacacagttactggtttgtcagtaagtccagatgggtcgtttttactttctaactcc
atggacaacacattacgtatgtgggatattcgtccatttgctccagcagatcggtgcaca
aagatttttacgggtcatcagcatacattcgagaagaatcttcttcgatgtgcatggtca
attgataatcgtcgtataactagtggcagtggtgatcgttatgttcatgtttgggatgtg
aacacacgacagttagtgtataaacttcctggtcacacagcatctgtaaacgaaactgca
tttcatccaacagaaccaatacttttatctgttggtagtgataagaaaatctttttgggt
gaaatcctgccttgtatgtattaa

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