Schistosoma mansoni: Smp_031010
Help
Entry
Smp_031010 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
smm03015
mRNA surveillance pathway
smm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Smp_031010
09122 Translation
03013 Nucleocytoplasmic transport
Smp_031010
03015 mRNA surveillance pathway
Smp_031010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_031010
03041 Spliceosome [BR:
smm03041
]
Smp_031010
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_031010
03012 Translation factors [BR:
smm03012
]
Smp_031010
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_031010
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Smp_031010
mRNA cycle factors
Stress granule specific factors
Smp_031010
Spliceosome [BR:
smm03041
]
Complex C
Other components
EJC/TREX
Smp_031010
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
Helicases
Smp_031010
Translation factors [BR:
smm03012
]
Eukaryotic type
Initiation factors
eIF-4
Smp_031010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
CMS1
Fuseless
AAA_19
Motif
Other DBs
NCBI-GeneID:
8351477
NCBI-ProteinID:
XP_018653893
UniProt:
G4VPJ1
LinkDB
All DBs
Position
W:6634186..6641105
Genome browser
AA seq
463 aa
AA seq
DB search
MNGFLEMDALSESDFNLSESLKSYPTFASMGLKDNLLKGIYAYGFEKPSLIQQKTIKQII
LGRDLIAQAQSGTGKTATFSIGTLQNILPEICQIQVLVLAPTRELAVQIHHVMSSLSDYL
SIRCVACCGGRNNTMQMARELDKGVHVVVGTPGRVLELLRQGNIRLNKLRSLVLDEADEM
LNRGLHDQLEEIYRRLPSHTNLNNKKSVNCQIVIISATMLKEHLELFQNLTSNPVCVLVP
RDELSLSDLQQFYIDVGSEEWKFEALNDLFSSVCVSQTVVFVNTRRKVEWLASQLKREGF
TVAAAHGDLDQSQRESVMKQFRSGECRILISSDMWARGIDVQTVGLVVNFDLPMNTSEYL
HRIGRSGRFGRTGLAVSFIANAEERKQLLEICNYYQIAIPPAPARLDKMLVTNNSVHSSP
KIANSPCKSDTNNGQPVQHHQLAKHLKRKKKQRKRKKNLNTAK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatttttggaaatggatgcgttatccgaaagtgacttcaatttatccgaatca
ctgaaatcttacccaacgtttgcttctatggggttaaaagataaccttttgaaggggatt
tatgcctacgggtttgaaaaaccttccctaattcaacagaaaactatcaaacaaataatt
ttaggaagagatttaattgcacaagctcagagtgggactgggaaaacggcaacatttagc
ataggaactttgcaaaacattctccccgagatctgtcaaattcaagtgctagtcttggca
cccactcgcgaattggctgtccaaatacatcatgttatgtcatcattgtctgattacttg
tctatcagatgtgtcgcctgttgtggtgggcgaaacaatactatgcaaatggctcgcgaa
cttgataagggagtgcatgttgtcgttggtactccaggtcgagtgttagaacttcttcga
caaggtaacatacgtttaaacaaactacgttctttggttttggatgaagctgatgaaatg
ttaaatagaggattacacgatcagttagaggagatatatcgccgcctcccatctcacact
aatttgaataacaaaaagtctgtcaattgtcaaattgttatcatctcagctacaatgctt
aaagagcatttagaattgtttcaaaatctcacatctaatcctgtttgtgttcttgtacca
agagacgaacttagtctttctgatcttcaacagttctatatcgatgttggctcagaggag
tggaaattcgaagcgttaaatgatttattttccagtgtttgtgtttcacaaactgttgtc
tttgttaatactcgacgaaaagttgagtggcttgcaagtcagttgaaacgagaaggcttt
acagtggctgctgctcatggtgatcttgatcaaagtcaacgagagtcagttatgaaacaa
tttcgttctggtgaatgtcgtattttaatcagtagtgatatgtgggctagaggtattgat
gttcaaacagtgggattagttgtgaattttgatttgccaatgaataccagtgaatactta
catcgtataggccgttctgggcgttttggacgtactggtctagctgtgagttttattgcc
aatgctgaggagcgtaaacagcttttagaaatttgcaattattatcaaattgctattcca
ccagcaccagctcgtttggacaaaatgttagtcactaataattctgtacacagttcaccc
aaaatagcaaattcaccatgtaaatctgatacaaacaacggtcaacctgtacaacaccat
caacttgctaagcatctaaaacgtaagaaaaaacaacgcaagaggaaaaaaaacttgaac
actgcaaaataa
DBGET
integrated database retrieval system
