KEGG   Schistosoma mansoni: Smp_032800.1
Entry
Smp_032800.1      CDS       T01095                                 
Name
(RefSeq) putative wd-repeat protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
smm  Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:smm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smm03041]
    Smp_032800.1
Spliceosome [BR:smm03041]
 Complex B
  Other components
   Complex B specific factors
    Smp_032800.1
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_VPS8 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 LisH_TPL Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_SCAP WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_WDR19_1st RMC1_N eIF2A Beta-prop_IP5PC_F WD_LRWD1 KNTC1_N DUF7899 WD40_like VPS8_N Beta-prop_WDR75_2nd Beta-prop_LRRK2 HTH_19 DUF7165
Other DBs
NCBI-GeneID: 8348663
NCBI-ProteinID: XP_018649595
LinkDB
Position
2:complement(1035557..1058769)
AA seq 509 aa
MISNVVRLIEQYLKESNLLRTLRTVQEETRVSLNTVESIESFVSDIINGHWDIVLQTVQY
LKLPEQKLMDLYEQIIIELIELRDIGAARSILRQTEPMITMKRTQPDRYTHLDNLLNRSY
FDPREAYSDGQSKDKRRQALATSLSEEVSVVAPSRLLALLSQALKWQQHQGLLPPGTAID
VFRGKAAVREQEEEKPPTKLSTVIRVVQKCHVECARFSPDGQFLVTGSVDGFIEVWNFTT
GKLRKDLKYQAQDTFMMMEDSVLCLTFSRDSEMLASGAKDGTIKIWRIQNGQCLKRLEKA
HHKGVTAIQFSKDNTHILSASLDHSIRIHGMKSCKIIKEFTGHTGVVNSVAFLPDGHNII
SGSADGSVRIWSIRSGECTNTFKAISGLVGHEVSIHSVHLMPRNTDQFVVASRSNTVAIM
NMQGQIVRSFSSGKREGGDFLDCTLSGRGEWIYCVAGDHLLYCFNVAAGGKLERTMRIHE
KEVIGCAHHPHQNLIATYSEDGLVKLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgatctcaaatgtagtacgcttaatagaacagtatttaaaagaaagtaatttattacga
acattacgtacagtacaggaagaaacaagagtatcattgaatactgttgaatctatagaa
agttttgtatccgatattattaatggtcattgggatattgttttacaaactgtacaatat
ttaaaattaccagaacaaaaattgatggatttatatgaacaaattatcattgaattgata
gaactacgtgatattggtgcagctagatcaatccttagacaaaccgaaccaatgattact
atgaaacgtacacaacctgatcgttatacacatttagataatcttttgaataggtcatat
tttgatccaagagaggcttattcagatggtcaatcgaaagataaacgtcgtcaagcactg
gctacttcattgtctgaagaagtaagcgttgtagctccgtcacgtttgctggcattactt
agccaggcgcttaaatggcaacaacatcaaggattgttaccacctggtacagcaattgat
gtatttcgtggtaaagctgcagtacgtgaacaagaagaagaaaaaccacctactaaattg
tctactgttatacgagtagttcaaaagtgtcatgtcgaatgtgccaggttcagtccagat
ggtcaattcttagtgactggttcagttgatggcttcattgaagtatggaattttacaact
gggaagctaagaaaagatctaaaatatcaagctcaggatacatttatgatgatggaagat
agtgtattatgtttaacatttagtcgtgattctgaaatgttagcatctggtgctaaagat
ggaacaattaaaatttggcgtatacaaaatggtcaatgtttaaaacgtttagaaaaagca
catcataaaggtgttacagcaatacaattctctaaagataatacacatatattatcagct
agtctagatcatagcattcgaatacatggaatgaaatcgtgtaaaattattaaagaattt
actggtcatacaggtgttgtaaattctgtagcatttttacctgatggacacaatataata
agtggaagcgctgatggttctgtacgcatatggtcaattcgttcaggagagtgtacaaat
acatttaaggcaatatctggtctagttggtcatgaagtatcaattcattcagttcattta
atgcctcgtaatacagatcaatttgttgtagctagtcgttctaatacagttgctatcatg
aatatgcaaggacagattgttcgaagtttttctagtggtaaacgtgaaggtggagatttt
cttgattgtacacttagtggtagaggtgaatggatttattgtgtagctggagatcattta
ttatattgttttaatgttgctgctggtggtaaattagaacgaacaatgcgaattcatgaa
aaggaagtgataggttgtgcacatcaccctcatcaaaaccttattgctacttattcagaa
gatggtttagtaaaactgtggaaaccttga

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