Schistosoma mansoni: Smp_034550
Help
Entry
Smp_034550 CDS
T01095
Name
(RefSeq) putative alpha-actinin
KO
K05699
actinin alpha 1/4
Organism
smm
Schistosoma mansoni
Pathway
smm04517
IgSF CAM signaling
smm04518
Integrin signaling
smm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
Smp_034550
04518 Integrin signaling
Smp_034550
04519 Cadherin signaling
Smp_034550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_034550
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smm04812
]
Smp_034550
04147 Exosome [BR:
smm04147
]
Smp_034550
Membrane trafficking [BR:
smm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
Smp_034550
Cytoskeleton proteins [BR:
smm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
Smp_034550
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Smp_034550
Exosomal proteins of colorectal cancer cells
Smp_034550
Exosomal proteins of bladder cancer cells
Smp_034550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
Spectrin
EFhand_Ca_insen
EF-hand_6
EF-hand_7
EF-hand_1
CAMSAP_CH
Mce4_CUP1
DUF1617
Motif
Other DBs
NCBI-GeneID:
8342003
NCBI-ProteinID:
XP_018648088
LinkDB
All DBs
Position
1:complement(20094419..>20135089)
Genome browser
AA seq
899 aa
AA seq
DB search
MEYGYTVYPDEYFPSVQEEEEEEWDRQAYLDPMWEIQQKKTFTAWCNSYLRKVKCSIENI
EEDFTDGLKLIQLLETLSEEPLPKPDRGKMRFHKLANVNKALDYIESKGVQLVSIGAEEI
VDGNIKMTLGMIWTIILRFCIQDITVEEMSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKD
GLAFCALIHRHRPDLIDYSKLSKDNPIQNLNYAFDVAEKHLDIPRMLDAEDMVNTVRPDE
RSVMTYVSAYYHAFAGAQKAESAANRITKVLKSNQDNEKLMREYEQLASDLLAWIEQQIP
FLKDRTTDGTISGARSKLDHYRGYRGFEKPPRLDEKTLLENTYNTLQTRLRLANRPSFLP
TEGHMIEDIDSAWRQLENYEKGFEDWLVAEIKRLEQIEYLAKKFRLKCLTHEAWADGKAN
ALSLEDYEGASLSTLRALAQKHASFEGDLGAHQNRVERIVAIAEELNQLNYDEVQSVNER
TQNIVEQWDNLGRLSEIRKHKIQGILDLLNQIDQLHLSIAKRIAPFNNWLEQVHEDLQDM
FIVNKVEDVMSLINGHENFKKTLPAAQKELNDIITEAEQVKKLIQSHNLSSELLKNPYTM
IDCSTLQSRWDAMYSLISGRDDALHQELVKQQENDKVNTQFAQLANRFGPYLEHNLETVH
SIVTNQKLSLEDQLQRLNKVEEDLEGWKPTITELEKLHQKQQEFLITHNPHTRYTMETLR
VGWEQLKTNIKRGQNEIENRITANDYRGVTEQQIEECRRCFNHFDKHRTRRLDPLDFRAC
LVSLGFTIPNSSQGEADFMRIMKTVDPHCTGYVTFDAFMQFMSQQTMGADTVEQMVNSFR
TLAGDTPYITTEQLKRELEPELADYCINRMKAYNGPGVANGGALDYTSFAASLYGESEL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagtatggttacacagtctatccagatgaatactttccttctgtacaggaagaagag
gaggaggaatgggaccgtcaagcctatttggatccaatgtgggaaatacagcagaaaaag
actttcacagcatggtgcaattcatatctacgaaaagtgaaatgctcaattgaaaatatt
gaggaagatttcactgacggtctcaagcttattcaactgttagagactttatctgaggag
ccgttaccgaaacccgatagaggaaagatgcgtttccacaagctcgcgaatgttaataag
gcattagattatatagaaagtaaaggcgttcagctagtctctattggcgctgaggaaatc
gtggatgggaatatcaaaatgactcttgggatgatatggacaattattttacgattttgt
attcaagatattaccgttgaagaaatgtctgcgaaagaaggtcttttattgtggtgccag
cgcaagactgctccctataaaaacgtgaacgtacaaaattttcacatgagttggaaagat
ggtttggcattctgtgctctaatacatcgtcatcgaccagatctgattgactattcaaag
ctttcaaaagacaatccgatacagaatttaaattatgcttttgatgtagctgaaaagcac
ttggatatcccacgaatgttggatgctgaagatatggtaaatacagtgagaccagatgaa
aggtctgttatgacttacgtttcagcttactatcatgcatttgcaggtgcacaaaaggct
gagtcagcagccaatcgaattacgaaagttttaaaaagtaatcaagacaatgagaaatta
atgcgagaatatgaacaacttgcatctgatttattggcttggattgaacaacaaatacca
tttttaaaagatagaacaactgatggaaccatatctggagctcgttcaaaactggatcat
tatagaggttatcgaggatttgaaaagcctcccagattagatgaaaaaacattgctagaa
aatacatataatacacttcaaacacgattacgactggcaaatcgtccatcttttcttcca
actgaaggacatatgatcgaagatattgattcagcatggcgtcagttagaaaactacgag
aaaggttttgaagattggttagttgctgaaattaaacgacttgagcaaattgaatattta
gctaaaaaattccgtttaaaatgtttaactcatgaagcatgggctgatggaaaagcaaat
gcactttcattggaagactatgaaggggctagtttatcaaccttgcgtgctttagcacaa
aaacatgcttcatttgaaggggatttgggtgctcatcaaaatcgagtggaacgtattgtg
gctatagctgaagaactgaatcaattgaattatgatgaagttcaatctgtgaatgaacgt
actcaaaatattgtagaacagtgggataatttgggacgattatcagaaatccgaaagcat
aaaattcagggcatcttggatttgcttaatcaaattgatcaattgcatttatcaattgcc
aaacgcattgcgccttttaataattggctagaacaagttcatgaagatcttcaagatatg
tttattgtgaataaagttgaagatgtaatgtctcttattaatggacatgaaaattttaag
aaaactcttccagctgcacaaaaagaattgaatgatataattacagaggcagagcaagtg
aaaaaactgattcaatcgcataatttatcatcagaattattaaaaaatccatacacaatg
attgattgctctacattacaaagtagatgggatgcaatgtactcattgattagtggaaga
gatgatgcattacatcaagaacttgttaaacaacaagaaaatgataaagtcaatactcaa
ttcgctcaattagccaatcgttttggaccatatttagaacataatctagaaacagtacat
tctattgtaacaaatcaaaaattatcactagaagatcaattacaacgtttaaataaagtt
gaagaagatttagaaggatggaaaccaacaataactgaattagaaaaacttcatcaaaaa
caacaagaatttctgattacacataatcctcatacacgatatacaatggaaactttacgt
gttggatgggaacaattgaaaactaatataaaacgcggtcaaaatgaaatcgaaaatcgt
ataacagctaatgattatcgtggtgttacggaacaacaaattgaggaatgtcgtagatgt
tttaatcattttgataaacatagaacacgtcgattagatccgttagattttagagcttgt
cttgtatcacttggctttaccataccaaatagttctcaaggtgaagctgatttcatgcgt
attatgaaaactgttgatccacattgtactggttatgtgacgtttgatgcgttcatgcaa
tttatgtcacaacaaacaatgggagctgatacagttgaacaaatggtcaattcatttaga
actttagcaggtgatacaccatacattacaacagaacaattgaaacgtgaattggaacct
gaactggctgactattgtattaatcgtatgaaagcatacaatggaccaggtgtcgcaaat
ggtggcgctttggattatacctcatttgcagcaagtctatacggtgaatctgaattgtaa
DBGET
integrated database retrieval system
