KEGG   Schistosoma mansoni: Smp_037380
Entry
Smp_037380        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
smm  Schistosoma mansoni
Pathway
smm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Smp_037380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smm03021]
    Smp_037380
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_037380
Transcription machinery [BR:smm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Smp_037380
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     Smp_037380
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_2 zf_CCCH_4 Torus zf-CCCH_3 zf-CCHC zf-CCCH_4 Nab2-like_zf-CCCH_ zf-CCHC_3
Other DBs
NCBI-GeneID: 8349640
NCBI-ProteinID: XP_018655327
LinkDB
Position
W:47458919..47460073
AA seq 307 aa
MDNLIADVSDIDFIIESQLENQIGLGCLPFSNMNKSGAGVCRFFITNQCPLNNLCPLRHI
KADRTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKFGECMNKECPFLHIDPASK
VQDCPWYDRGFCRNGPLCRNRHVRRVACKNYINGFCPKGRECKYAHPIWWPLPGSDQDTQ
KSRWICHYCNERGHKIQFCLKLSPEERLRLQEQQRMQNISTGGAALPQQGVNPGSRFVSE
RLKFGGLMGTSQAAPTGPRQGPQKPLDEVTCFKCGEKGHYANRCNKGYLAFLSKVSLQPH
EMESARG
NT seq 924 nt   +upstreamnt  +downstreamnt
atggacaatttaatagcagatgtatcagacattgactttattattgagagccaactagaa
aatcaaattggattaggatgtctgcctttttcaaatatgaacaagtccggtgctggcgtt
tgtcgtttttttattactaatcaatgtccccttaataatttatgtcctttgagacatatc
aaagctgacagaacagttgtatgcaaacattggcttcgcggattgtgcaaaaaaggcgat
gactgcgagttcctacacgaatatgatatgactaaaatgccagaatgttactttttttcg
aaatttggagagtgtatgaacaaagaatgtccatttcttcatattgaccccgcttctaaa
gtacaggattgcccctggtatgatagagggttttgcagaaacggtcctttgtgccggaat
cgacatgttagacgagtagcgtgcaaaaactacataaatggtttttgtcccaaaggacgt
gaatgtaaatatgcgcaccctatatggtggccccttccaggaagtgatcaagatacacag
aaaagccgctggatatgtcactactgcaatgaacgtggacacaaaatacaattttgcctc
aaactatcacctgaagaacgtcttcgactacaggagcagcagcgaatgcagaatattagc
actggcggcgcagcgttacctcaacaaggtgttaatcccgggtctcgttttgtttcagaa
cgtctcaagttcggcggtcttatggggacctcacaggcagctcctactggacctcgacaa
ggcccacaaaaaccacttgacgaagtgacgtgtttcaaatgtggagagaaaggacattat
gcgaaccgatgcaacaaaggctacttagcatttctcagtaaggtttcactacaacctcat
gaaatggagagtgctcgtggctga

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