Schistosoma mansoni: Smp_040540
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Entry
Smp_040540 CDS
T01095
Name
(RefSeq) putative atp-dependent transporter
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_040540
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Smp_040540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA
AAA_28
AAA_22
AAA_15
RsgA_GTPase
AAA_16
NACHT
AAA_14
AAA_25
AAA_30
AAA_23
NB-ARC
AAA_33
ATP-synt_ab
Zeta_toxin
DUF5517
Motif
Other DBs
NCBI-GeneID:
8347560
NCBI-ProteinID:
XP_018649446
UniProt:
G4VB63
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All DBs
Position
1:61317812..61333261
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AA seq
644 aa
AA seq
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MPSEDKKKKAQAKKDAVKKRNQKQTRSVPTVLDNDSDVKTDKNTNPTPQNGFVSQSSNHD
QTRDDDFVGSDDENKEVHQSLVETLECLDLVSERVAAYRSVTGVLASHPEARDVQFSNLS
ITFHGKALLADTRLELNNGQRYGLIGPNGCGKSTLLAVIANGELPVPPHVDIFLLQREMT
PTNKTALECVMEVDEERVRLEKEAAQLALDDDPETHERLLEVYQRLDHLDADKAEAKAAE
LLHGLGFTSEMQKKEVRHFSGGWRMRIALARALFVRPALLLLDEPTNHLDLNACVWLERQ
LVNYPRCLVVISHSQDFLNGVCNHIILMNKQKLTYFGGNYDQYVRTRSELEENQMKRFKW
EQDQIASMKDYIARFGHGNKKMARQAQSKEKVLQKMVAGGLAERVEGDKTLTFYFPDPGK
IPPPVIQVHQVSFRYGPDKPWIYRNIDLAIDLDRRVALVGPNGAGKSTLLKLVAAELDPT
DGLVRRHSHVRMGRYHQHLHEMLDINMSPVDWMMQCYPEIKERDDMRKLLGRYGLSGPQQ
VCPIRTLSDGQRCRIIFAWLAQKAPHLLLLDEPTNHLDIETIDSLAEAIDNFEGGLLLVS
HDFRLISQVAKEIWVCENGTITPWEGDIFSYKKHLMRSVLNESK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgaggataaaaagaaaaaggctcaagcaaagaaagacgcggtcaaaaagcga
aatcaaaagcaaacgcggtcagtaccaactgttttagacaacgatagtgatgtaaagact
gataagaatacaaatcctacccctcaaaatgggttcgtatctcaatcttcgaatcacgat
cagacacgtgatgatgacttcgtgggtagtgatgacgaaaataaggaagtacaccagtcg
ttagttgaaactttggaatgcttggatcttgttagtgaacgtgttgccgcttatcggtct
gttactggagtcctagcctctcatcctgaagctagagatgtgcagttttcaaacttaagt
atcacttttcatgggaaagctttattagctgatactcgtttggaattaaacaatggtcaa
agatatggattgattggcccaaatggttgtggcaaatctactcttctcgctgtaatagcc
aatggagaacttcctgtaccacctcacgttgatatttttctgttgcaacgtgaaatgaca
ccaacaaacaaaactgcattggagtgcgtaatggaagttgacgaagaacgtgtacgttta
gaaaaagaagctgcacaattggcattagatgatgatcctgaaacacatgaacgtttacta
gaggtttatcaacgtttagaccatttagatgcggacaaagctgaagcaaaagcagccgaa
cttcttcatggtttaggatttacctctgaaatgcaaaagaaagaagttcgtcattttagt
ggtggttggcggatgagaatcgctttagctcgagctttatttgttcgtcccgcattactg
ctactggatgaaccaacaaatcatctggatttgaatgcttgcgtttggttagaacgtcag
ctagtcaattatccacggtgtttagttgtaatatcacattcacaagattttttgaatggt
gtttgtaaccacattattctgatgaacaagcagaaattgacctatttcggtggtaactac
gatcagtatgtgcgcactaggtccgagttggaggaaaatcaaatgaagcggttcaagtgg
gaacaagatcagattgcttcgatgaaggactacatagctaggtttggacatggaaacaaa
aaaatggcacgtcaggcacaaagcaaagagaaagttttacagaaaatggtagctggcggt
ttagctgaacgtgttgagggagataagactctaacattctactttcctgaccctgggaaa
ataccaccacctgttattcaagttcaccaagttagctttcgatatggaccagataagcct
tggatttatcgtaacattgatttggccatcgatttagatcgtcgcgttgctttagtcggt
ccgaacggtgcagggaaatcaactttgttaaaattagtcgctgctgagttggatccgact
gatggtcttgttcgtcgacattcacatgttcgtatgggtcgttatcatcagcatctacat
gagatgttggatattaatatgagtccagtcgattggatgatgcagtgttatccggaaatt
aaggaacgtgatgatatgagaaaattacttggacgttacggtttgtcagggcctcaacaa
gtatgccctattcgtacattatctgatggacaaagatgtcggattatatttgcatggctt
gctcaaaaagctcctcatcttttgctacttgacgagcctacaaatcatttagatattgaa
acaatagactcactagctgaagctattgataatttcgaaggtggtctactacttgttagc
catgactttaggctcatatctcaggttgcaaaagaaatctgggtatgtgagaatggtact
ataactccttgggaaggtgatattttctcttataaaaaacatttgatgcgaagcgttcta
aatgagtctaaatag
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