Schistosoma mansoni: Smp_041760
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Entry
Smp_041760 CDS
T01095
Name
(RefSeq) putative chromodomain helicase DNA binding protein
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_041760
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Smp_041760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CDH1_2_SANT_HL1
CHD1-like_C
ResIII
DUF6511
DEAD
Cdh1_DBD_1
MobB
Motif
Other DBs
NCBI-GeneID:
8345585
NCBI-ProteinID:
XP_018652255
UniProt:
G4VJQ0
LinkDB
All DBs
Position
4:21447926..21467688
Genome browser
AA seq
1825 aa
AA seq
DB search
MVDELHVLKKRIRTLSESSRSDGSISHTEQSESSPQDDTVLSNSPPQPVRSRKQNIRELR
EEFEDYPELYGIRRSARSRKEPLRFKASEKDTTDALFREKRRNRFPSSSDSNNVTDSETD
DWNDNISTRHRTVRTRGNRVNYKSAFVDDSFDESNDEPSERSSSSIFKPINQRTSYGTVP
ILNQQTCFQKPRGPLVRKPYAPVLASRNSKSFIKSDDNNVDQIGVKEQYSEEDEDGVSGE
VNREIEWGVDDEEADVIEEILTHAIRRKGATGNPTTLYNTQLEKDLNAGFNPKQEDGELQ
FLIKWRNWSHIHSTWETESSLRNPDRGAPVAGMKKFYAYQAIMREKSERLQYVEREELET
VAYEEERDEQLLQDKMNVERIVAHSRDPETNTFDYLIKWFRLDYRFCTWESGKVIHLLYE
SAVQAYETRCNSTTLPNRKCEVLYTRPKFLPLMEQPSYLGRSEELRLRDYQLEGINWLVR
AWTRRNSVILADEMGLGKTIQTIGFLSYLFNEHQVYGPFLIVVPLSTISSWQKELQTWAP
EMNTIIYTGDHVSRQLIREHEWSTGASNNRRHQSLKFNVCVTTYEILLKDKGWLSQVNWA
FLGVDEAHRLKNDSSQLYKTLKTFETNTRLLVTGTPLQNTMKELWALLHFIMPDCFPDWE
EFEQTYSVSPDDPANKMNSEAFHNLHKTLKPFLLRRVKKDVESSLPEKIEQILRVDMTKE
QANIYRLILARNYDGLLKVTRGHKASFINIVMELKKCCNHAHLIAPPSEVDQQYLTKEDR
LRSFLKGSGKGTLLDKLLQRLKSKGHRVLIFSQMVRMLDLIADYLSLRGWGFQRLDGSIR
GEVRKQALDHFNCEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAH
RIGQTKQVSVYRFVTRESVEEKIIESATRKMVLDHLVIQRMDSAGIRSGRRGDTAKGHLL
TEILRYGAEGLFKQADEDATELEVDIDDILNRAETRDTEATVESNPANALLSSFKVVNLD
ALEEDTDIKNGNDSLNSSINTGCEKTWDQIIPSEFRGQVKAEQDRKTLVELELGPRRRRP
VKTFQAGLNVNQSSSETSESEENDKVLPTQLTEKEIRALVRAIRHFARPLERIDAIAADA
ELPDHSESELREVVDAVLKGCRTAMEAASINSNEESQKQATGGKGPVFQYGRVSVAARPL
LQSLEYLETLHLCLPSTSKEARMSYELPFTPKLVAWSCNWDNTDDVRLLAGVYEHGYDNW
ETIKLDADLGLGSKLLPVSQTERPQANHLRSRVDYLLKMLAKCHSSVSKNTEQQVVTKKR
RKEDRESNKSNQKAKTITSKANVKHTNKQIYTPINSMPKSAEFVETDDSSSESDYNKDND
DKQEENDIDNDNISNQLLKNTKQSRKSTNKSKIKSEKRDKYISELKPPTLQPLLSNHQEN
LSNVSTMIFTKKEEDEFRNMQGPIFVKCKKKFVPIKKHFKELEDLERTDEQNPVKLANVV
LQIGDHIHSIIDVYPEKEKRHAWKNYLWEFVHIFSKNSTEELRHVYRHAVKRRLKEQRKK
INDADSNFPPKHNNSLRNSNNSIDYSETTSNRHSSNRDYYSNSNNNDNSTGNAALFRRYH
TNRLSSHDRNDRHEQHGGYSHGGQNKYYNNSNNDWSSSITSSHKEFNRDRNNNSSRFNNA
FNRPPGQSNVKHHKDNGGFTSQMYSSPRVVSSHYHHQQQHNSGSYSSGHYPWTNYSSSDD
MINSSSPKMETYKYASHYPPVLSSSTLSSLPESINSTTTTTKTPSYFSSMGQCLPPPPPP
PPPLLQQQHATNQLSRDPRLSSSRR
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgaacttcacgttcttaagaagaggattagaacactcagtgaatcttccagg
agtgacggatccatatctcatacagagcaatctgaatcttcacctcaggacgacactgtt
ttatcaaattcaccaccgcaaccagtcagatctagaaaacaaaatataagagagcttcgt
gaagaatttgaagattatcctgaactgtatggtatacgtagatctgcacgaagtcgcaaa
gagccattacgtttcaaagcatcagagaaagatacaactgatgcactttttcgagaaaag
agaagaaatcgttttcctagcagttcagatagtaataatgtaacagatagtgaaacagac
gattggaatgataatatatcaacacgacatcgtactgtaagaacacgaggaaatcgtgtc
aattacaaaagtgcttttgtagatgacagttttgatgaatctaacgatgaaccatcggaa
cgatctagttcgagtatatttaaaccaatcaatcaacgaacttcatatggcactgtacca
atactaaatcaacaaacgtgttttcaaaagccaagaggtcctttggtccgaaaaccttat
gcaccagtcttggcaagcagaaattcgaagtcattcataaaatcagatgacaataatgta
gaccaaattggcgtaaaagaacaatattcagaagaggatgaagatggtgtaagtggtgaa
gttaaccgggaaattgaatggggagttgatgatgaagaagcggatgttattgaagagata
ttaactcatgctattcgacgtaaaggtgccactggtaatcctaccactctgtataataca
caattagaaaaagatttaaatgctggttttaatcctaaacaagaggatggtgaattacag
tttcttattaaatggcgtaattggagtcatattcattcgacatgggaaactgaatcttca
ttacgtaatccagatcgaggtgcaccagttgctggtatgaaaaaattctatgcatatcaa
gcaattatgcgagaaaaaagtgaacgtttacaatatgttgaaagggaagaactagaaact
gtggcttatgaagaagaacgtgatgaacaattattacaagataaaatgaatgttgaacgt
atagtagcccatagccgtgatccagaaacaaacacttttgattatctcattaaatggttt
cgtttggattatcgattttgcacctgggaatctggaaaggttatacatttactctatgaa
tcagcagttcaagcttatgaaactcgttgtaattctaccacattacctaatcgaaaatgt
gaagtactctatacacgaccgaaatttctaccactaatggaacaaccttcctaccttgga
cgctcagaggagcttcgtctacgtgattatcaacttgaaggtattaattggttggttcgt
gcttggactcgtaggaacagtgtgattttagcagatgaaatgggattagggaaaactatt
cagactattggatttctttcatatttgttcaatgagcatcaggtatatggaccttttctt
attgttgttcctttgagtactatatcaagctggcaaaaagaactgcaaacttgggcacca
gaaatgaatactataatatatactggtgatcatgtatcacgacaattgattagagagcat
gaatggtcaactggagcttctaataacagacgtcatcaatcattaaaattcaatgtttgt
gtaactacttacgaaatcttattaaaggataaaggttggcttagtcaagtaaattgggct
tttttaggagttgatgaagctcatcgtttaaaaaatgattcaagtcaattgtataaaact
ttgaaaacatttgaaacaaatacccgtctattggttacaggaacacctttacaaaacact
atgaaagaattatgggcattattacattttattatgccggattgttttccagattgggaa
gaatttgaacagacttacagtgtttctcctgatgatccagctaataaaatgaatagtgaa
gcatttcataatcttcataaaacattaaaaccttttctacttagacgagtgaaaaaagat
gtagaaagttcattaccggaaaaaattgaacaaattctgcgagttgatatgactaaagaa
caagcaaatatatatagattaattttagcccgtaattatgatggattattaaaagtaaca
cgtggccataaagcttcttttattaatattgttatggaattaaaaaaatgttgtaatcat
gctcatttaattgcacctccatctgaagttgatcaacagtatttaactaaagaagatcga
ttaagatcatttttaaaaggtagcggtaaaggtaccttattagataaattattacaacgt
cttaaatcaaagggacatcgagttcttatctttagtcaaatggttcgtatgttagatctt
atagctgattatttaagtttacgtggttggggtttccaacgtcttgatggatcaataaga
ggtgaagtacgtaaacaagcattagatcattttaattgtgaaggttcaaccgatttctgt
tttttattgtctacacgtgcgggtggtcttggtattaatttagcaacagctgatactgtc
atcatatttgattctgactggaatcctcaaaatgatttacaagcccaagcacgtgcacat
cgtataggtcaaactaaacaagtatcagtgtatcgttttgttactcgtgaatctgtggaa
gagaagataattgaaagtgctacacgaaaaatggttttagaccatttagttattcaaaga
atggattcagctggtatccgtagtggtcgacgtggtgatacagctaaaggtcatttactt
actgaaattcttcgttacggtgcagaaggattatttaaacaagcagacgaagatgctaca
gagttggaagttgatattgatgatattctcaatcgagcagaaacacgagatacagaagct
acagtagagtctaatccagctaacgctttactctcttcattcaaagttgtaaacctcgat
gcattggaagaagatactgatattaaaaacgggaatgattcattaaattcttcaataaat
acaggatgtgaaaaaacatgggatcaaattattcccagtgagtttcggggacaagtgaaa
gcagaacaagacagaaaaactctagttgaacttgagttgggcccacgacgtaggcgtcct
gtcaaaacttttcaagcaggactaaatgttaaccaatcctcttctgaaacatcggagtct
gaagaaaatgacaaagttctcccaactcaacttacagaaaaagaaattcgcgctttggtt
cgtgcgatcagacattttgcgcgccctctggaacgtattgatgcaatagcagctgacgct
gagcttcccgatcattctgagtctgaacttcgtgaggtggtagatgctgttctaaaaggt
tgtcgaacagccatggaagcggcctccatcaattcaaatgaagagtcccagaaacaagcg
actggtggtaaaggacctgtttttcaatacggtcgcgttagtgtggctgcaagaccttta
ttacaaagtctagaatatctagaaacccttcacctctgtctaccctccaccagcaaagaa
gcacgtatgtcttatgaattgccgtttactcctaaactagtcgcgtggtcatgcaattgg
gacaatactgatgatgttcgacttttagcaggagtttatgagcacggatatgacaattgg
gaaacaatcaaactagatgctgacttaggtctcggctccaaactacttccagtttcacaa
acagaacgtccacaggccaatcatttacgatcgcgtgtggattatcttttaaaaatgtta
gctaaatgccattcatcagtcagtaaaaatactgaacagcaggtggttactaaaaaaaga
agaaaagaggacagagagtcaaacaaatcaaatcaaaaagctaaaacaatcacttcaaaa
gccaatgtaaaacatactaataagcaaatatataccccaataaattcgatgcctaaatca
gcagaatttgtagaaactgacgactcatcatcagaatcagactataataaagataatgat
gacaaacaagaagaaaatgacattgataatgataacatatcaaatcagctgttaaaaaat
actaaacaatctagaaaaagtacaaataaatcaaaaattaaatctgagaaaagagataaa
tatatttcagaattaaaacctcctacacttcaacctttattatctaatcatcaagagaat
ttatctaatgtatcaacaatgatatttacaaaaaaagaagaagatgaatttcgtaatatg
caaggtccaatttttgtaaaatgtaaaaagaaatttgtaccgattaagaaacatttcaaa
gagttggaagatcttgaacgaactgatgaacaaaacccagtaaaactggctaacgtcgtt
ttacaaattggtgatcatattcattccattatagatgtatatcccgaaaaagagaaacgt
catgcatggaaaaattatctatgggagtttgtgcatatcttttcaaagaattccactgaa
gaacttcgacatgtctacagacatgctgtgaaacgtcgattaaaagaacaaagaaaaaaa
ataaacgatgccgattccaattttccaccaaaacataataattcattacgcaacagcaat
aatagtatagattattctgaaacgacatcaaatcgtcattcttcaaatcgcgactactat
agtaatagtaataataatgataacagcactggtaatgctgcattatttcgacgatatcat
acaaatagattatcgtcacatgaccgaaatgatcgtcatgaacagcatggtggttacagt
catggtggacagaataaatattataataatagtaataatgattggtcttcttctattaca
agttcacataaagaattcaatcgagataggaacaacaatagttcacgtttcaataacgct
tttaatcgtccaccgggtcaatcgaatgtaaagcatcacaaagataatggaggttttact
tcacagatgtattcttcacctcgtgttgtctctagtcattatcatcatcagcaacagcat
aattccggtagttattcttctggtcattatccttggactaattattcatcatcagacgat
atgataaatagttcctcccctaaaatggaaacatacaaatatgcctcacattatccacct
gttttatcatcatcaacattatcttctttgcccgaatcgattaactctactaccaccact
actaaaacgccatcatatttctcatccatgggacagtgtcttcccccaccacctcctcct
cccccgccccttctacaacaacaacatgcaactaatcaactatcacgtgatcctcgactt
tcctcatcaagaagatga
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