Schistosoma mansoni: Smp_045250
Help
Entry
Smp_045250 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K14406
cleavage stimulation factor subunit 1
Organism
smm
Schistosoma mansoni
Pathway
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Smp_045250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_045250
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Smp_045250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
WD40_WDHD1_1st
CSTF1_dimer
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
eIF2A
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
Tricorn_2nd
Cytochrom_D1
Beta-prop_WDR75_2nd
Frtz
Motif
Other DBs
NCBI-GeneID:
8350548
NCBI-ProteinID:
XP_018649969
UniProt:
G4VBS1
LinkDB
All DBs
Position
2:complement(<11771705..11794875)
Genome browser
AA seq
429 aa
AA seq
DB search
MSFKERDLLYRLIISQLFYDGFQTMAVNLVNLVSPSAACGPSNRLFRLVKLGLSASEDEH
EKSGVIEGESIAPGTGIDLEVESESSTMAPEAALYETCYVTAHKAACRAASFNSTGQLVA
TGSHDSSIKILDVERMLAKSVSPTDHLGQETPQQQMETHPVIRTLYDHTAEVTCVDFHPD
PTLQILVSGSKDYTIKLFDFSNPSVKKAQRNIPEASPIRTLHFHPSGNFLLVGTQHKTLR
LYDVQTCRCYVSAVPEDQHLSAVNMVRWSPNGTAFVTAGMDGSFKIWDGVSCRCVNTFEA
AHDGAPVCSVVFSRNGKYILSSGKDSAVKLWELATGRCLITYTGAGTVGHQTHRSMAVFN
HTEDYVLFPDEATKSLCCWDSRNADRQRLLSLNHNGPIRCFVHSPTTAAFMSCSDDNRAR
FWYKRPISD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaagaaagggatttactgtatcgtctgatcattagccaactgttttatgat
ggttttcagactatggccgttaatctggttaatcttgtaagtccttcagcggcatgtggt
ccatccaatcgcctattccgtctcgtaaaactcggcctttctgcttctgaagatgagcat
gagaagtcaggcgttattgaaggtgaaagtattgccccaggcacgggaatcgatctggaa
gttgagagtgaaagttctacaatggctcctgaggcagctctatatgaaacttgttatgta
acggcacataaggcagcctgtcgtgcagcatcctttaatagcacaggtcagttagttgca
acaggatctcacgattcttcgatcaagatacttgatgttgaacgaatgctagccaaaagt
gtctcaccaactgaccatttaggtcaagagacacctcaacaacaaatggagactcatcca
gttatacgaacactctatgatcatacagctgaagttacatgtgtagatttccatccagac
ccaacactgcaaatccttgttagtggaagtaaagattatacaatcaaactgtttgacttt
tcgaatccatctgttaaaaaagctcaacgaaatattccggaagcttccccaattcgaact
ttacattttcatccatctggtaactttttacttgttggcactcagcataaaacacttcgt
ttatatgacgtacaaacctgtcgttgctatgtatcagccgttccagaagaccaacatctt
agtgcagttaatatggtgaggtggtcaccgaatggaactgcttttgttactgctgggatg
gatggcagcttcaagatttgggatggagtttcatgtagatgtgttaacacatttgaagct
gcacacgatggtgcacctgtgtgttctgtagttttttcacgtaatggaaagtatatcctt
agttctggtaaagatagtgcagtcaaactatgggaattagccaccggacgatgtcttata
acctacactggagcaggcacagtaggacatcaaacacacagatcaatggctgtctttaat
cacacagaagattatgtactattcccagacgaagcaacaaaaagcctgtgttgttgggac
tcacgtaatgctgacagacaacgtttattatcccttaatcataacgggccaatccgatgt
tttgtacattcaccaacaacagcagcatttatgtcctgtagtgatgataatcgtgcaaga
ttttggtataaacgtcctatatcagactga
DBGET
integrated database retrieval system