KEGG   Schistosoma mansoni: Smp_045250
Entry
Smp_045250        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
smm  Schistosoma mansoni
Pathway
smm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Smp_045250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_045250
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     Smp_045250
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WDR55 WD40_WDHD1_1st CSTF1_dimer WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_RIG_2nd eIF2A Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_RSE1_2nd Tricorn_2nd Cytochrom_D1 Beta-prop_WDR75_2nd Frtz
Other DBs
NCBI-GeneID: 8350548
NCBI-ProteinID: XP_018649969
UniProt: G4VBS1
LinkDB
Position
2:complement(<11771705..11794875)
AA seq 429 aa
MSFKERDLLYRLIISQLFYDGFQTMAVNLVNLVSPSAACGPSNRLFRLVKLGLSASEDEH
EKSGVIEGESIAPGTGIDLEVESESSTMAPEAALYETCYVTAHKAACRAASFNSTGQLVA
TGSHDSSIKILDVERMLAKSVSPTDHLGQETPQQQMETHPVIRTLYDHTAEVTCVDFHPD
PTLQILVSGSKDYTIKLFDFSNPSVKKAQRNIPEASPIRTLHFHPSGNFLLVGTQHKTLR
LYDVQTCRCYVSAVPEDQHLSAVNMVRWSPNGTAFVTAGMDGSFKIWDGVSCRCVNTFEA
AHDGAPVCSVVFSRNGKYILSSGKDSAVKLWELATGRCLITYTGAGTVGHQTHRSMAVFN
HTEDYVLFPDEATKSLCCWDSRNADRQRLLSLNHNGPIRCFVHSPTTAAFMSCSDDNRAR
FWYKRPISD
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtctttcaaagaaagggatttactgtatcgtctgatcattagccaactgttttatgat
ggttttcagactatggccgttaatctggttaatcttgtaagtccttcagcggcatgtggt
ccatccaatcgcctattccgtctcgtaaaactcggcctttctgcttctgaagatgagcat
gagaagtcaggcgttattgaaggtgaaagtattgccccaggcacgggaatcgatctggaa
gttgagagtgaaagttctacaatggctcctgaggcagctctatatgaaacttgttatgta
acggcacataaggcagcctgtcgtgcagcatcctttaatagcacaggtcagttagttgca
acaggatctcacgattcttcgatcaagatacttgatgttgaacgaatgctagccaaaagt
gtctcaccaactgaccatttaggtcaagagacacctcaacaacaaatggagactcatcca
gttatacgaacactctatgatcatacagctgaagttacatgtgtagatttccatccagac
ccaacactgcaaatccttgttagtggaagtaaagattatacaatcaaactgtttgacttt
tcgaatccatctgttaaaaaagctcaacgaaatattccggaagcttccccaattcgaact
ttacattttcatccatctggtaactttttacttgttggcactcagcataaaacacttcgt
ttatatgacgtacaaacctgtcgttgctatgtatcagccgttccagaagaccaacatctt
agtgcagttaatatggtgaggtggtcaccgaatggaactgcttttgttactgctgggatg
gatggcagcttcaagatttgggatggagtttcatgtagatgtgttaacacatttgaagct
gcacacgatggtgcacctgtgtgttctgtagttttttcacgtaatggaaagtatatcctt
agttctggtaaagatagtgcagtcaaactatgggaattagccaccggacgatgtcttata
acctacactggagcaggcacagtaggacatcaaacacacagatcaatggctgtctttaat
cacacagaagattatgtactattcccagacgaagcaacaaaaagcctgtgttgttgggac
tcacgtaatgctgacagacaacgtttattatcccttaatcataacgggccaatccgatgt
tttgtacattcaccaacaacagcagcatttatgtcctgtagtgatgataatcgtgcaaga
ttttggtataaacgtcctatatcagactga

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