Schistosoma mansoni: Smp_047110
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Entry
Smp_047110 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_047110
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_047110
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
Helicases
Smp_047110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
8347753
NCBI-ProteinID:
XP_018654713
UniProt:
G4VN93
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Position
W:28756968..28767720
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AA seq
607 aa
AA seq
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MDIPADDNLVGLDFDVDSSVVKKKEKCKSSKAKQYRLSHDIKVSAINRQSKIPPPIYSFW
SKFCQISDLILHNLSELGYKTPTPIQSQSIPIMMQHRNLLACAPTGSGKTAAYLLPVLNQ
LLSANTSENSEVMDNITEETSSKHKIFPFAVILAPTQELMHQIRSEAIRLFSGIQADCYI
AALHKKHYFVRYRKKARNVSKNDVLSTKPRKVRELKLPSSTKILISTPSRLSTLLSLPSE
HCPIDLSRLSWLVVDECDKMLEVNFNDISFSNTEHGNKTKYRPRGFHNQVAPIFEFIQKV
NLTGQSIRRPLVALFSATVPDEVVSWARNQLPVLLKLDSSEYELIQLRVGIRNAAVSTVK
QELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDRANEILKEILLSDADILANVISSD
KTEAQRASVVRAFREGQLHVLICTDLLGRGIDFKGVSMVVNYDVPPLKQEYIHRVGRTGR
AGHHGRAITLWTDSDLPHMDGILSVMKRSGSEVDEELERLVNEWKKRRVNLMCKQSKAER
KQLLDGSISRRRGERRLAYKVLKNCNKEKNAENIDIHDKSSWFRPWNPHRGRISEVPGAL
SKKRKIG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatattccagctgatgacaacttagttgggttggattttgatgtggattcttcagtt
gtaaagaaaaaggaaaaatgtaaatcgtcgaaagctaaacagtataggttatctcatgac
atcaaagtttcagcaataaacaggcaaagcaaaattcccccaccaatctattcattttgg
agcaaattctgtcaaatcagtgatctgattttacataacttatctgagctaggatacaaa
actccaacacccatacaatcccaaagcattcctatcatgatgcagcaccgtaacctactt
gcttgtgcacctacaggttccgggaaaacagcagcttatcttctcccggtgctcaatcag
ttgctaagtgcaaacacctctgaaaattctgaggtcatggacaatataactgaggagaca
tcatctaaacataaaatattcccatttgctgtgatcttggctccaactcaagaactaatg
catcaaattcgttctgaagctatcaggctattttctgggatccaagcggactgttatata
gcagcgttgcacaaaaagcattattttgttcgctacagaaagaaggccagaaacgtttct
aaaaatgatgttttatcaacgaaaccaagaaaagttcgtgaattgaaattaccctcaagc
actaaaatcctaatttctacccctagtcgattaagcactctattatctcttccatcagaa
cattgtcccattgatttatccagactgtcttggcttgtagtagatgaatgcgataaaatg
ttagaagtcaattttaacgatatatccttttctaacactgaacatggtaacaagacaaaa
taccgacctcgaggatttcataatcaggttgcgcctatttttgaatttattcagaaagta
aacctcactggacaatcaattaggagacctttagtcgctttattttcagctactgttcct
gatgaagttgtttcatgggcacgaaatcagctgcctgtcctcttaaaattagacagttcg
gagtatgagttaattcagttacgagtaggtatccgaaatgctgctgtttctactgtcaaa
caagagttacgttattgtgctacagaacaggggaaattgttagagatgcgttatctattg
gctaatggactagcttatccatgtttaatttttatgcagtctcgagatagagccaatgaa
attcttaaggaaattctattgtctgatgcagatattcttgcgaatgttatttcaagtgac
aaaacagaagcacaacgtgccagtgtggttcgcgctttccgtgagggacagcttcatgtt
cttatctgtacggatctattgggtcgtggaatagactttaaaggtgtcagtatggtagtc
aattacgatgttcctccgttaaaacaagaatatatacatcgcgttggtcgaactggccga
gctggtcaccatggacgggctattaccttatggactgattctgacctcccgcatatggat
gggatattatctgtgatgaaaagaagtggttctgaagtcgatgaagaactagaaagactt
gtaaatgaatggaagaaaaggcgggtaaaccttatgtgtaaacaatcaaaagctgagagg
aaacaactcttagacggttcgattagtcgtcgacgtggtgaaagacgccttgcttacaag
gtgcttaagaactgcaacaaagaaaagaatgctgaaaatattgacattcatgataagagc
tcgtggtttagaccatggaatcctcacagaggtcgtataagtgaagtacctggtgcgcta
agcaaaaaacgcaagattggatga
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