Schistosoma mansoni: Smp_047420
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Entry
Smp_047420 CDS
T01095
Name
(RefSeq) putative autocrine motility factor receptor, amfr
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
smm
Schistosoma mansoni
Pathway
smm04137
Mitophagy - animal
smm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Smp_047420
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Smp_047420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_047420
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
Smp_047420
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_047420
Multi subunit type E3
ERAD complex
Smp_047420
LMBR1L-GP78-UBAC2 complex
Smp_047420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
TPR_SYVN1_N
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-C3HC4_4
Zn_ribbon_IFT122_C
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
8348102
NCBI-ProteinID:
XP_018649884
LinkDB
All DBs
Position
2:8928718..>8933126
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AA seq
489 aa
AA seq
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MTKDAKPEGTGNSTSLNYPTMALTCCLEDSWCFWSLINSGYCLLMYAARELQNLFFGQLR
SAEDSHIRENFSSFIFYKVVFIYGILHVEVLHELLLWATWFTILGFLRLLTGLIRDRSQY
TLRCSDFSLTYQARIFLLCCLLLLFSNVLMIISIIVGAKHSLNTMFFMLAEVFQLLIVTV
HVITWYVVYLYCEVASRLNDDDKVYHRFVLLYYTEFVFDTIADFGDVFHNLHMLFWNKLQ
INMSSIIVALHLQHLYYKVSKRFVHHKRYKNVLKKLDTRIVYSKENCPICWEKMRKSCQL
PCGHIFHTACLYLWIEQNNNCPVCRKCFDDLNDLSPNTVATNLPTTSPSPFSTSESSEIS
RGPSDESSFHPLSSSTSQIGFCSENQLSARKSCETDVPTTKNSGFPDREITADSLLPTNK
FISSNESYFSAMVSMDRLLDVHDQLIAEDVANVRTRPKNVLPAKFLAMLEAELLNHIDPT
EEELFLTIV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagatgctaaacctgaaggaacaggaaattctacctcactaaactacccaaca
atggcattaacttgctgtctggaggacagttggtgtttttggagccttataaactctgga
tattgtttgctgatgtacgctgcaagggaactgcaaaatttgtttttcggtcaacttcga
agcgctgaagactcacatatcagggaaaatttctctagttttattttctataaggtggtt
ttcatttatggtattctgcacgtagaagttcttcatgaactccttctttgggcaacttgg
tttaccatacttggctttctgcgtcttcttactggtcttatcagggatcgttcccagtac
actcttcgttgttctgatttctctcttacctatcaagcccgaatatttttactatgctgt
ttactcctgcttttcagcaacgttcttatgattatctcaatcatcgtgggtgctaagcat
tctctcaatactatgttctttatgcttgcagaggtattccaacttttgattgtcactgtg
catgttatcacgtggtatgtagtttatctatattgcgaagtcgcctcgcgtcttaatgat
gacgataaagtgtaccatcgctttgtgcttctttattacacggagtttgttttcgataca
attgctgattttggcgatgtattccataacctccatatgttattttggaataaacttcaa
ataaatatgtcgagcatcattgttgccttgcaccttcaacatttatactacaaagtttct
aaacgttttgtgcatcacaaacgctataagaatgtactaaaaaaattggatactcggatt
gtttattccaaagaaaattgtcctatttgttgggagaaaatgcgcaaatcttgtcaactc
ccctgtggacatatttttcatactgcctgtttatatctgtggattgaacaaaataataac
tgtcctgtatgcagaaagtgctttgatgatttaaacgatctatctccaaatacagtagca
acaaatttacctacaacatctcccagtcccttttctaccagtgaatcttccgaaatatcg
agaggtccgagcgatgagtctagttttcacccattatcatcctcaaccagtcagataggt
ttttgttctgagaatcaacttagtgcaagaaaatcgtgtgaaacagatgttccgactacg
aaaaattctggttttcccgatcgtgaaataacagccgattcattacttcccacaaataag
ttcatttcatccaacgaatcgtacttctcggcaatggttagtatggaccgtctgttggat
gtacacgatcagttgattgcagaagatgttgccaatgttcgaacccgtccaaaaaatgta
ttacctgcaaaattcttagctatgctggaagcagaattacttaaccatatcgatcctaca
gaggaagaattatttctgaccatcgtatga
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