Schistosoma mansoni: Smp_049730.1
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Entry
Smp_049730.1 CDS
T01095
Name
(RefSeq) putative metastasis-associated protein 1 (mta1)
KO
K11660
metastasis-associated protein MTA
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_049730.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_049730.1
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_049730.1
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
Smp_049730.1
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
Smp_049730.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
ELM2
Myb_DNA-binding
MTA_R1
Motif
Other DBs
NCBI-GeneID:
8341517
NCBI-ProteinID:
XP_018649128
LinkDB
All DBs
Position
1:complement(50482296..50501471)
Genome browser
AA seq
706 aa
AA seq
DB search
MTSNNMYRVGDFVYFEVAAASPYHIRKIEELNKTPTGAVEAKVVCFYRRRDLSPNLIQLA
DKHQKLGTCGDDTQPDILHQIHHRELFLSRHLETLPATHIRGKCTVTLHTETEPYHIYLT
KDDTFFFQLVYDPLQKTLQADQGSIREGPQYQAEIEPYHPCLEYSADESIHEQLLWRPDN
NLTPSDLDSYLLLIRSLATLGRSFYPPHILRQPNLTMSAAAAARDTTHQFALDTLHSANY
NISQALQMLAPRGQPILKLDEMEQWSASEGNLFEEALEKYGKCFYEIQNDFLPWKYPKSL
VEFYYMWKTTDHYVQQKRMKAIEAEHHLKQVYIPNYNKPNPAVLYPVTSDSGSSASGCEG
CPNLTSTMCSDSKTMGVSKTNISITELQARKNSSTVSTDHSTKSNDLGVNNSNAYMLASK
VRTSVSFHFVASVTLRIARRLCVTSNPRRRARQPFKRLTFLTDFHNDTLPLLTKLTPAES
HKLTQRFRNISSVNKCKSPGVSLHSLVSRLHKTKCRSSNGVETVFTGEPLSMTTENPRYA
SSDTALDLAVDGSVTTCDSGSLKDPGSMPNSDEHSDADCISNKNPNATIPDDDSNVEVIS
NNHGCINLGPKRRFTVGSDVDGASTLMYRATQLIKRSRRKFLSLAELRRFGRHPWFDFNV
GLHSQNGQHPVSSSNLKKKSHTVTTNSTAETDLPNPGIVTSSSSAH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaataatatgtacagggttggggattttgtctacttcgaagttgctgcagca
tcaccatatcacatcagaaaaatcgaagaattgaataagactcccactggcgcagtagag
gccaaagtagtatgtttctataggcgacgagacttgtcaccgaacttgatacagctggcc
gacaaacatcaaaagttaggaacttgcggtgatgatacgcaaccggatatactgcaccag
atacatcatcgtgaattgttcctttcccgacatctggaaacacttccagcaacacatatt
cgtggaaaatgcacagttactctacatactgaaacggaaccttatcatatctacctgacg
aaagatgacactttcttctttcaattagtgtatgatccgttacaaaaaactctccaagct
gaccaaggatctattcgggaaggtcctcaatatcaagcagagattgagccttaccatcct
tgtctagaatattccgccgacgaatctatacatgaacagctgctctggcgaccagataac
aatttaacaccctcagatctagactcatatctcctcttaattaggtctcttgctacattg
ggcaggtctttttatccaccacatattctccgtcagccaaaccttacaatgtctgcagct
gcagcggccagagataccacacaccagtttgctttggatactttacattctgctaattat
aatatctctcaagcacttcaaatgttagctcctcgtggacaaccgatcttgaagttggat
gaaatggagcagtggtcagcaagtgaaggcaatctttttgaagaagcgttggaaaaatat
ggaaagtgtttttatgaaatacaaaatgacttccttccttggaagtacccaaaaagtctt
gtggaattctactacatgtggaaaactacagatcattatgtccagcaaaaacgtatgaag
gctattgaagcagaacatcatctaaagcaagtatacattccaaattacaacaagccgaac
ccggctgttctttatccagttacatctgattctggtagctcagcatctggatgcgagggt
tgtcctaaccttacatcaactatgtgctcagattccaaaactatgggtgtctcgaaaact
aatatttccatcactgaactccaagctcgtaagaactcatccactgtttcaactgaccac
tctacaaagtcgaatgacttaggagttaataattcgaatgcatatatgctagcatctaaa
gttcgtaccagcgtaagctttcattttgtcgctagtgtcactcttcgaatcgctcgtcgg
ttgtgtgtgacttcaaatcctcgacgccgagctcgtcaaccattcaaacgtctcacattt
ttaactgatttccataacgacactctcccgttgttgactaagcttactccagctgaatct
cataaacttacacagcggtttcgaaatatatcttcagtaaacaaatgcaaatcccctgga
gtttctttacattctttggtctcacgattgcataaaacaaaatgtcgttcatccaatgga
gtagaaacagtcttcactggtgaacctttatctatgaccacagaaaacccgagatatgcc
tcttcagatactgctctcgacttagctgtggacggttcggtcactacatgtgattccgga
agtctcaaggatcccggttctatgcctaacagtgatgagcattcagatgccgactgtatt
tctaataagaaccctaacgcgacaattcctgatgatgactcgaacgttgaagtcatatca
aacaatcatggatgcataaatttgggtccaaaacgtcgttttactgttgggtctgatgta
gatggtgcttcaactttgatgtaccgagccactcaactgattaaacgttctcgacgtaaa
tttttgtcgttagctgaacttcgtcgtttcggtcgtcatccttggtttgattttaatgtg
ggtttacattcacaaaatggtcaacatcccgtttcttcttcaaatttaaagaagaaatct
catacagtcacaaccaattcgactgcagaaactgatcttccaaatcctggtattgtcact
tcatcgtcaagtgcacattga
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