Schistosoma mansoni: Smp_049880
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Entry
Smp_049880 CDS
T01095
Name
(RefSeq) nuclear pore glycoprotein P62, putative
KO
K14306
nuclear pore complex protein Nup62
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_049880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_049880
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_049880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Mis12
Motif
Other DBs
NCBI-GeneID:
8341537
NCBI-ProteinID:
XP_018645678
UniProt:
G4LWN8
LinkDB
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Position
4
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AA seq
522 aa
AA seq
DB search
MPDGLGSSSGLKLSNMSGFSFGKPATTSAFAFGSSPFGTSAGTKPTFGVSTSTTSLFSPA
VASSSNTAVCSSSLLQNSPSLSLTSTSGFGTVATTSNAFGLSSFASLAKPSTTVSTFGTS
SITGLGTNSNLTPTSQSALNQPSVNPLPSLLKPATTTSNVGSSFTFGLTTAISTQSTVTP
PISFGTLSSTTVSTGAPTASIVNVHASQPAIPSSIGFGVSSASLSSSAITSTAATIAMTS
YNFGNPSLSTLAKSAAASGFGTSSLGIATRTLGETATTAAAITTSLCATIATTTTSIPSA
TTTSSVSVTSSQTLTYNQLEELVNKWTLELEEQERYFFDEADRINQWDQTLICNAENITA
MYKKVEMCQCEQSRLEQELDFIEGQQRELESLLEPLERAVNELPPGQLHSDYEREAIFQL
ATNVDLELGQLLTDLREIADQTNTTTMNVTTGFNSSDNSTTTTNATKENTMINGNNKLTS
SNNGDIMNQITRILNCHMHSLNWIHHNTQEIMDRLKVLNGVS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgccagatggccttgggagttcaagcggtcttaaactttcaaatatgtcaggattttca
tttgggaagcctgcaaccactagtgcttttgcatttgggtcgtctcctttcggaacatct
gctgggacaaaaccaacatttggagttagcacgtccacaacatcactattttctccggct
gtcgcatcgagttccaatactgctgtatgcagctcttcactccttcagaactctccatct
ttgtccttgacatctacttctggattcggtacagtcgcaactacttcaaatgcttttggt
ttgtcatccttcgctagcttagcaaagccatctacaacggtatctacttttggtacttct
agcatcactggtttgggaacaaactcaaatctcacaccaacctcacaatctgctcttaat
cagccatcagttaatcctttacccagcctcttaaaaccggctactacgactagtaatgtt
ggaagttcattcactttcggactgactactgccatttctactcaaagtacagtaactcct
ccaattagttttggcactctttcttcgacgactgtgtctactggggctcccacagcctcc
attgtaaatgttcatgcaagtcaaccggccatacctagtagtattggttttggtgtatct
tcagcctcactatcatcctcagcgatcacatcaacagcagcaacaatagcaatgacatct
tacaactttgggaaccctagtctctccacattggctaaatcagcagcggcttccgggttc
ggaacgtcatcattggggattgcaactcgaacactaggtgaaacagccactactgcagca
gcaataactacatcattatgcgctaccatcgcgacaacaaccacttctattccgtccgcc
actactacatctagtgtatctgtcacatcctctcaaactcttacttacaatcagttggaa
gaattggtcaataaatggactcttgagcttgaggaacaagaacgatatttcttcgatgaa
gcagatcgtattaatcaatgggatcaaaccttgatttgtaacgcagaaaatataacagct
atgtacaaaaaggtagaaatgtgtcaatgtgaacagagtcgtcttgagcaggaattagat
tttattgaaggtcaacaacgtgaattggaaagtttactggaaccactagaacgtgcagtg
aatgaattaccacccggtcagttacattcagattatgaacgtgaagctatatttcaattg
gctacaaatgtcgacttagaattaggtcaactattgactgatttacgtgaaatagccgat
caaacaaacaccactacaatgaatgttactactggttttaattcatcggataatagtaca
actactacgaatgccactaaggagaatactatgattaatggtaataataaactaacttca
tcaaataacggggatattatgaatcaaattacgcgtattctgaattgtcatatgcattca
ctcaattggattcaccataacacacaagaaataatggatcgtttaaaggtgttgaatggt
gtttcataa
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