Schistosoma mansoni: Smp_049970.1
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Entry
Smp_049970.1 CDS
T01095
Name
(RefSeq) zinc finger protein, putative
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_049970.1
04121 Ubiquitin system [BR:
smm04121
]
Smp_049970.1
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_049970.1
Membrane trafficking [BR:
smm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
Smp_049970.1
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_049970.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
Zn_ribbon_19
zf-ANAPC11
zf_RING_Vps8
zf-RING_Vps41
zf_RING_Vps8_fungal
RINGv
Tmpp129
Rad50_zn_hook
Zn_ribbon_6
zf-Nse
HypA
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
8353254
NCBI-ProteinID:
XP_018645667
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Position
4
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AA seq
275 aa
AA seq
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MATGSSGDSYYCHSCEAEVVPNLQDFTCSACHSGFIEAISPGGLSSNPTELDAMQMIGQL
FGGSLSDNFVRYFAAPRDDLSSTDDESLERESLSRRSRRSTRNSNHRSTRERVYTRVPDG
RHAFSTRIQLSSVDHPFRLPFLSNFGSADGDMQNFVFNRAMFDQFITVLMNELQVGPPPA
PESAIADLPTISLTEEQALKLGICSICFDDFKESESVIRLPCAHTYHQTCVTTWLKQHGT
CPVCRKDLSGHDTSRYEDPAPNLTGNSNGSSSSTS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgggagttcgggtgatagctactattgccactcttgcgaagctgaggtcgtc
ccaaacttgcaggactttacatgctcagcgtgtcactcaggtttcattgaagcaattagc
ccaggtggtttatcatcgaatccaacagaattagatgcaatgcagatgataggtcagcta
tttggaggttcgcttagcgataattttgttcgctattttgcagcacctagagatgatctt
agttcaacagatgatgagtcattagaaagggaaagtttatctagaaggtcgcgacgatca
acaaggaattcaaatcataggtcgacacgagaacgtgtgtatactcgtgttcctgatggt
cgtcatgctttttccactcgtatccagttatcaagtgtggatcatccattcagattgcca
ttcttatcaaacttcggatcagctgatggagatatgcaaaattttgtttttaatagagct
atgtttgaccagtttatcactgtgttaatgaatgagttacaagtgggtccgccacccgcc
ccagaatcagccattgcagacttacctacaattagtttgactgaagaacaagcattaaag
ttgggtatttgttcaatatgctttgatgatttcaaagaatccgaatcagttatcagacta
ccatgtgctcacacctaccatcaaacttgtgttacaacatggttaaaacagcacggaact
tgtccagtttgtcgaaaggatttatccggacatgatacttcacgatatgaggatccagct
ccaaacttaacaggaaatagtaatggttcaagctcttccacttcttag
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