Schistosoma mansoni: Smp_049990
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Entry
Smp_049990 CDS
T01095
Name
(RefSeq) casp, putative
KO
K09313
homeobox protein cut-like
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_049990
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
Smp_049990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
Filament
DUF2205
DUF6184
Motif
Other DBs
NCBI-GeneID:
8353258
NCBI-ProteinID:
XP_018645664
LinkDB
All DBs
Position
4
Genome browser
AA seq
699 aa
AA seq
DB search
MTELSDLCVTVMETVVASVYNSWRDVAFGDLQKTLESVACELTSNHEKNDISRTNLVNQT
KEFRKSASEDVRKYCSTVIKCYQSEFDALQKRCRYAEEAYLSMYKQLIELPDPSFALGEL
HSLQKRADKAVEFEFESRKFKESCDELKTKVQELKNYERENKRLKKRLDELTVSLETQIQ
LNSSKIVDEYQRKLESKEQEFAIFKAEAEEKLGSFESKNIAISKALEMAQSELFRLKTEV
NATETGRSSELELLMDDLEKSNAKLASAEAELAKLREDHADIPKLPIADISRLQCRIEEL
EFELSSCSQQKSSLLDQLESLKSSKSSNEKNLENCIQELQTTICQTKASLEAANIKLDSQ
SDYEEIKRELSLLRSIEFPENVQLNGSDNFIQDEISNRAPLEVLLLKKNKSLENQLAEVN
ILREKLQIELTQVQSNEVEANQRIKEQTELIKLLESDLYRLQTNLDESLKLNDSRNRLEG
HLLAEVIGDQKPSQYNQSLLNIVQNQRDRFRTRAEELEQNEINLRQQLVSLQREVESVRA
DNVKLYEKIRFLHSYGNPVIQNRQNNLSNQHPSSPVTTSLSPSPFQNHESNDATIIKYSQ
VYEAQLNPFNQFSRYEKQRVYKKLQPYEKLMLHLGRFVSSDRRLRLGVFLYAIFLHLFIF
IALYKAAHFQHSALETEANCHSRFEKHMREVHNQDGGNL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactttctgacttgtgcgttacggttatggaaactgtcgtagcctcagtttat
aattcctggcgcgatgttgcatttggtgacttacaaaaaactttggaatcagtagcatgt
gagctgacttctaatcatgagaaaaacgatatttcacggactaatttagtaaaccagact
aaagagtttcgaaaatctgcttccgaggatgtacgtaaatattgttcaacagttatcaag
tgttatcaatcggaatttgatgcacttcaaaagaggtgtagatatgccgaagaagcttat
ctttcaatgtacaaacaacttattgagcttccagatccctcgttcgcacttggcgaactt
cattccttacaaaaacgagctgacaaagctgtagaatttgagttcgaatcacggaaattc
aaggaaagctgtgacgaattaaaaacgaaagttcaggagctcaaaaattacgaacgcgaa
aataaacgcctgaagaaacgtcttgacgagttgacggtttctttggaaactcaaattcag
ctgaacagttcgaagatagtggacgaatatcaaaggaagttggagtccaaagagcaagag
tttgccatctttaaagctgaggcagaggagaagcttggtagctttgaatctaaaaatata
gccatttccaaagcactggaaatggcacaatctgaattatttaggcttaaaacagaagtg
aacgctactgaaactggcaggtcttccgaacttgagttactcatggatgatcttgaaaaa
tcgaatgcaaaacttgcttctgctgaagcagagttggctaaattacgtgaggatcatgca
gatattccaaagttacccatcgcagatattagccgacttcaatgtcgcattgaagagctt
gaatttgaactgtccagttgttctcagcaaaagtcgtcattactcgaccagttggaatca
ctcaaatcttcaaagtcatccaacgaaaagaacctagaaaattgtattcaagagctgcaa
acaacaatttgtcagactaaagcttctctagaagcagctaatattaaacttgacagtcaa
tctgattatgaagaaataaaacgcgaactatctcttttacgctcaattgaatttcctgaa
aatgtccagctaaatggatcggataattttattcaagatgaaatatccaatcgtgctcca
ttggaagtacttcttttaaaaaagaataaatcattggagaatcagttggcagaagtaaac
attttacgtgaaaagttacaaattgaacttactcaagtccaatcaaatgaagttgaagcc
aatcaacgaatcaaagaacaaacagaattgataaagttattagaatctgatctttatcgt
ttgcagacaaatttggatgaatcattaaaattgaatgattcaaggaaccgattagaaggt
caccttcttgcagaagttatcggtgaccaaaaaccaagtcaatacaatcaatcattattg
aacattgtacaaaatcaacgtgatcgatttcgaacacgagctgaagaattagaacagaat
gaaataaatttacgccaacagttggtatcacttcaacgtgaagttgaatcagtacgtgct
gataacgttaaactgtacgagaaaatacgtttcttacactcttatggtaatcccgtaata
caaaatcgacaaaataatttatctaatcagcatccttcatcaccggtgacaacatcattg
tctccatcgccttttcaaaatcatgagtcgaatgatgcgactatcattaaatattcacaa
gtttatgaagctcagttaaatcctttcaatcaatttagtcgatatgagaaacaacgagtg
tataaaaagttacaaccatatgaaaaactgatgttacatttgggacgttttgttagttcc
gatcgtagacttcgcttgggtgtatttttatatgcaatatttttacatttattcatattt
attgcactgtataaagcagctcatttccagcatagtgccttagaaactgaagccaattgt
cattctcgctttgaaaaacatatgcgagaagttcataatcaagatggtggaaatctttaa
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