Schistosoma mansoni: Smp_050160
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Entry
Smp_050160 CDS
T01095
Name
(RefSeq) polycomb-m33 interacting protein ring1b,putative
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Pathway
smm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Smp_050160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_050160
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_050160
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_050160
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_050160
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
Smp_050160
Noncanonical PRC1 (PRC1.1)
Smp_050160
Noncanonical PRC1 (PRC1.3/1.5)
Smp_050160
Noncanonical PRC1 (PRC1.6)
Smp_050160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
RAWUL
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-RING_6
zf-UDP
zf-rbx1
DUF3836
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
8353272
NCBI-ProteinID:
XP_018645651
UniProt:
G4LWL1
LinkDB
All DBs
Position
4
Genome browser
AA seq
460 aa
AA seq
DB search
MSTENASKNWELTLYELHRKPQEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKEC
LHRFCSECIITALRNGNKECPTCRKKLVSKRSLRRDPNFDALISKIYPSRQEYEAHQDKI
LARLNRQHLSAALTRSLEQQLGLNGNNNTTTNSSNSSRSRNSTNTGRNQTVNNNSGNGGT
SEVHTDAGISEEETPSNFMSNGACSARRVSSTSHQVTNNSDTESGMDTNSIGENSSVSDL
PVLHYRNNTSAASSMFTTTAGGVADSNHPHTQYNCSMDRNIINNNNNSSSILHNNSNSTS
SMLSPSVFPEIEVLLKPHPRYSSQYTASNSMASSTSCSPSTSTGHRNNNNANSSNGNNNT
NSNYNDQGNGLIKYLKAPTITTVDHLCRYLTVRINLQRINREVSDESVRFILYSYHESTN
TYQLLDSHMSIEEISRDQFHGVNYLDLYYARDDILDDNNT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgagaatgcttcaaaaaattgggagcttactttatatgaattacatcgtaag
ccacaagagcctattaccgatggaacagttattgctgttagtccaagaagtttaaagagt
gaactaatgtgtccaatatgtttggatatattaaaagtgactatgacaacaaaagaatgt
ttacatcgtttttgctctgaatgtattatcaccgctcttcgtaatggcaataaagaatgt
ccgacatgtcgtaaaaagttggtgtcgaaaagatcgttaagaagagatccaaattttgat
gcgttaatttcaaaaatttatccaagccgtcaagagtatgaagcacatcaagataaaatt
ttagcacgtttaaatcgtcaacatttaagtgcagcattgacaagatcactagaacaacaa
ttaggcttaaatggcaacaacaatactactactaatagtagtaatagcagtagatcacga
aattcaaccaacactggacgtaatcaaacagtcaataataattctggtaatggcggaaca
agtgaagtacatacagatgctggaataagtgaagaagaaacaccgtcaaactttatgagt
aatggtgcttgttcagcacgacgtgtctcatctacatcacatcaagtaactaataattcg
gatactgaaagtggaatggatacaaattcaattggtgaaaatagttctgtatccgattta
ccagttttacattatcgtaacaatacatcagctgcttcttctatgtttactacaactgct
ggcggtgttgctgattcaaatcatcctcatactcaatataattgttccatggatcgtaat
attattaataacaataataatagtagtagtattctgcataataatagtaattcaacctca
tctatgttatcaccatctgtatttcctgaaattgaagtcttattaaaaccacatccacgt
tattcttcacagtataccgcttccaattctatggcttcatctacttcgtgtagtccatct
acatcaacaggacatcgtaataacaataatgctaacagtagtaatggtaataataatact
aatagtaattacaatgatcaaggaaatggtttaatcaaatatcttaaagctccgacaata
actacagttgatcatttatgtcgatatttaactgtacgtattaatcttcaaagaataaac
agagaagtatctgatgaaagtgttcgattcatcttatatagttatcatgaaagtacaaat
acttatcaattattagattcacatatgtctattgaagaaattagtcgtgatcaatttcat
ggagtaaattatcttgatttatattatgcacgagatgatatcttagatgataataatacc
taa
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