Schistosoma mansoni: Smp_050740
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Entry
Smp_050740 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_050740
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
Smp_050740
TFIIIC, fungi type
Smp_050740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
8343698
NCBI-ProteinID:
XP_018651763
UniProt:
G4VIA6
LinkDB
All DBs
Position
4:complement(6009967..6020339)
Genome browser
AA seq
486 aa
AA seq
DB search
MDLTFPSHTFYGVEFPAVVNNVETAIEMLGGLSQISEVFADDKRRLNLTFRPHMVYSKPA
CGDGHSSNSFVIRIQRLRNKVTGKLKLVPVILGRVTRVYKFDAMADFQFGPFERVPTTDK
SEGSKVIPPNYKIFYNDLIIKDPTTMIDSYLSRDMPLYLPPVLFSRQDTPSFYNFAPRYR
TTEYIQLEEKSHKLPVSRKARPTFGYLVNLDDVTPTSPRPGAIQRVINLGLSAIQVKDEI
QKLFDERPIWMRPALAYHMPADTRLIYFTQILPSVAYYMIRGPWSRAWVRYGYDPRKDPE
ARRYQVIDFRVQAYMVVRKLLCHSSSRKRMLCTDANKRVLADCRKSYESVHSREDSFFDE
LLNSSKKSQEDNIDYDGNDELDQTIIDDAEDDDADDRIQKSLGKVADYRFGPNNWPTTHQ
VRYCLSDIEIPEVQAMLEEVPERTEIDPVDGWLRPGGIKKIRDLLGQYLKKWISESDPTH
ADSGAE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacgtttccaagtcatacattctatggtgttgagttcccggcagtagtaaac
aatgtagagactgctattgaaatgcttggtggactcagtcaaatatctgaggtattcgct
gacgacaaacgtcgtttaaatctcacttttcgtccgcatatggtgtattcaaagcctgct
tgtggagatggtcattcgtccaactcatttgtcatacgtattcaacgtcttaggaacaag
gtaacaggcaagctcaaattagttcctgttattctgggacgcgtaactcgggtttataaa
ttcgatgccatggctgattttcagtttggtccatttgagcgtgttccgactacagataaa
agtgaaggatctaaagttattccacctaattataaaatattctacaatgatctcataatc
aaggatccaacaacaatgattgattcttatttatctcgtgatatgccgttgtatctccca
ccggtcttgtttagtcgccaagataccccaagtttttacaatttcgctcctcgttatcgc
acgactgagtacattcaacttgaagaaaagagtcataaactcccagtttcaagaaaggct
cgaccgacttttgggtatctagtgaacttggatgatgtaactcctacttctcctaggcct
ggagccatacaacgtgtaataaatcttggactatctgctattcaagtaaaggatgaaatt
caaaaactcttcgatgagagaccgatttggatgcgtccagcattggcttaccacatgcct
gcagatactcgattgatttattttactcagatacttccttctgtagcttactatatgatt
cgtggaccatggagtcgagcttgggtccggtatggttacgatcctcgcaaagatcccgaa
gctcgccgttatcaagtaattgattttcgagtacaagcttatatggttgtacgtaaatta
ttatgtcattcttcatcaaggaaacgaatgctatgcacggatgcgaataaacgagtttta
gcggattgtcgtaaatcttatgaatctgtacattccagggaggatagtttctttgacgaa
cttttgaatagctcgaagaaatcccaagaagataatatcgactacgatggaaatgatgag
ttagatcagactattattgatgatgctgaggatgacgatgctgatgacagaatacaaaaa
agtttaggcaaggttgcagattatcgttttggacctaataactggccaactacacatcaa
gtccgttattgtctctcagatatagagattcctgaggtacaggcgatgttagaagaagta
cctgagcgaactgaaattgacccagtggatggctggctccgacctggaggtatcaaaaaa
atacgtgatcttttagggcaatatttaaaaaagtggatatctgaatcagacccaacacat
gcagatagtggagccgagtaa
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