Schistosoma mansoni: Smp_055340.1
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Entry
Smp_055340.1 CDS
T01095
Name
(RefSeq) putative lin-9
KO
K21773
protein lin-9
Organism
smm
Schistosoma mansoni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIN9_C
DIRP
TBCC_N
DUF764
RFX_DNA_binding
TssO
Motif
Other DBs
NCBI-GeneID:
8354953
NCBI-ProteinID:
XP_018649495
UniProt:
G4V5N2
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Position
1:63137977..63151737
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AA seq
621 aa
AA seq
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MSSDAQNYSGDEGEEYNSPYRKNPPRVRKKNRYYSDDYYEPPTNYKPRLLHSPRPSVQPE
EMSPKVRKPAKLHKSMIGHMPWRTQMHHPERRMAQTNAVRLRNVLKLPKAHKWVFYEWFY
SNLDRPLLLGENDFRICLRESFPNVKTRRLSRAHWSLLRRLMGKPRRCSTAFFDEERRSL
NEKREKIRTLQATRSVQLEFLRDLPDDMHVPMPLIIGTKITARVRYPTDGLYTGKVDAID
ALRHCYRVTFDKPALGTRSIPDYEVLSILPQETIPLSAYKTQHKASRNLFMSPARLLAQS
ALQGKRHHMHHHKFGHGMGQGGGGSGDLAVHDCPLCQSEAAAAASGGTISGSPSTRTSNF
MTTTSTTNNDLLSTPLKLPAISSGDVAASMGSAALSLNESSGGRLLLNEADIYGGYPMKF
LVMVTKLSKILEVKKRCVDELQDLNDEAERKISNKAELSLEFQHTYLTLVMHLERLNKEL
NQYLVHVLQYANEIAQEHGVAPLEQAADFKQRCDEDAYEIVTRIKSMQAQKFRNLKTVDL
ITKLVSLLVQIRSLSEHEESTYDCSSIQESLHELKSSIHSSNVHVFENSVEISIHHTLSG
LCTLSNLNSFLYTHPNHFHYL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgctcagaattattccggggatgaaggagaggagtacaatagtccctac
aggaaaaatccacctcgggttcggaagaaaaaccggtactatagtgatgattattacgag
cctccaacaaactacaaaccccgattactgcattccccaagaccttctgtacaaccagaa
gaaatgtcaccaaaagtgcgaaagcctgctaaactgcataaatcaatgattgggcatatg
ccctggcgtacacaaatgcatcatcctgaaaggcgaatggcacaaacaaatgccgtccgt
ctgcggaatgttctgaagctacctaaggcacataaatgggtgttctacgagtggttctac
tccaatttggacagacctttattactaggcgaaaatgatttccgcatttgtcttcgtgaa
agcttcccaaacgtcaaaacccgccgtttatctcgtgcccattggtcattattacgtcgt
ttgatgggaaagccacgtcgttgctctacagctttcttcgacgaagaacgtcgttccctt
aatgaaaagcgtgagaagattcgcaccttgcaggctactcggtcagtgcagctagagttc
ttaagagatctcccggacgatatgcacgtcccaatgcccttaataatagggaccaagata
acagctagggttcgctatccaacggatggtttgtacactggaaaagttgatgctatcgat
gcactaagacattgctatcgtgtcactttcgataagccagctcttggcactcggtcaata
cctgactatgaagtcctgagtattttaccccaagaaactatacccttgtctgcatacaaa
acccaacacaaagccagccgtaatctcttcatgagtcccgctcgacttctagcgcaatct
gctttacagggcaaacgtcatcatatgcatcatcataaatttggacatggaatgggacaa
ggtggtggcggttccggtgatttagctgttcatgactgtcctttatgtcagtcggaagct
gcagctgcagctagtggtggaactatcagtggtagtccgtcgacgaggacttcaaatttc
atgaccaccacctctaccactaataatgatctcttgtcaactccgttaaaacttcctgca
attagcagcggtgacgttgctgcatcaatgggaagtgctgcactatcattgaatgaatct
tcaggtggtcgcttactgctcaatgaggccgatatatatggaggatatccaatgaaattt
ttagtcatggtgacaaaattatctaaaattctagaagttaagaaacggtgtgttgatgaa
ctacaagatttaaatgatgaagcagaacgaaaaatttccaataaagctgaattatcttta
gaatttcaacatacatatcttaccttggttatgcatttagaacgtttgaataaggaatta
aatcaatatttagtacatgtattacaatatgcaaatgaaatcgctcaagaacatggtgta
gcaccgttagaacaagcagctgattttaaacagcgttgtgatgaagatgcctatgaaatc
gtcacacgaataaagagtatgcaggctcaaaaattccgaaatttgaaaacagttgatcta
attacaaaacttgtcagtttacttgtacaaattcgttcattaagtgaacatgaagaatcc
acatatgattgttctagcatacaagaatctttacatgaattaaaatcgagtattcattct
agtaatgttcatgtatttgaaaacagtgtagagatatctatacatcatacattaagtggc
ctttgtacattaagtaatttaaattcatttttatatacccatcctaatcattttcattat
ttataa
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