Schistosoma mansoni: Smp_055770.1
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Entry
Smp_055770.1 CDS
T01095
Name
(RefSeq) putative protein phosphatase 2A regulatory subunit
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
smm
Schistosoma mansoni
Pathway
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Smp_055770.1
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smm01009
]
Smp_055770.1
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_055770.1
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_055770.1
Protein phosphatases and associated proteins [BR:
smm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
Smp_055770.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
Smp_055770.1
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
Smp_055770.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_1st
DUF5944
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
8355005
NCBI-ProteinID:
XP_018652471
LinkDB
All DBs
Position
4:29326516..29336789
Genome browser
AA seq
433 aa
AA seq
DB search
MQSPIGQYAAPSCDAVAQSGRLKWYCNEILRRIEGSGPISVIEFNKEGTHLAYGNSDGIV
SVIEIGQADLSEITHHRHSCSKPYQVFLSHEPEFDCLKSQAIEEKINLIRWLPKSGLSHF
LLSSNERTIKLWQLTELPTQSFTNLNFPVESGCRRKVVIRSLSDIKVPVCLKNYGNTNIR
VQNKKVFARAHGFSIVGLSPSADRETFFSADPLRINMWNLEVTNEVFSVIDHMLDRLDDR
SHLITGISCSNSSPSLFAYGTNRGSIFLCDTRSSSLCDHASLVFHSLAADESDVLTILTN
SVSDLKFGQCSDYIIFSRDYLSVKTWDSRMPTQPVEVYPVQRHLKKHLAVLYESELLFDD
FKLTISSNDRCIMTGSYNNTVKVFDRQNPIEGSYKLIMQDEDMNTFHDTFRTTDDNTSVF
VSPISSSTSSPDG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctattgggcagtatgctgctccgtcctgtgatgctgtggcccaatctgga
cgactcaaatggtactgcaacgaaattctcagaaggatcgagggttcaggacctatttca
gtgatagagttcaacaaagaaggcacacatctggcttatggaaattctgatgggattgtt
agtgtcattgaaatcggccaagcggatctctctgaaataacacaccatcgccattcctgt
tcaaaaccgtatcaagtttttttaagccatgaaccagagtttgactgtctgaagtcccaa
gcaatagaggagaaaatcaatcttatacgctggctcccgaaatctgggctttcccacttc
ttgttatcttccaatgaacgtactataaaactttggcagttgactgaactgccgacacag
tcgtttacaaatttgaatttccctgttgaatcgggttgccgacgtaaagttgttatcagg
tcattatccgatatcaaagtccctgtctgtttgaagaattatggaaatacaaatatacgt
gtacagaataaaaaagtatttgctcgtgcccacggcttttcaatagtcggtttgtcaccc
tctgctgaccgtgagactttcttctctgccgatccactgaggattaatatgtggaacttg
gaagttactaatgaggtgttcagtgtcattgatcatatgcttgatcgtttggacgatcgc
tcacatctgatcactggaattagttgtagcaattcttccccatcattatttgcatatggc
actaacagaggttcaatttttctttgtgacacacggtcaagctctctttgtgatcacgct
tctcttgtttttcatagtcttgctgcagacgaatcagatgtgcttaccattctcactaat
tccgtttccgacttgaaatttggccaatgctccgattatattatattttcccgtgattat
ttgagcgttaaaacttgggattcacgaatgccaactcaaccagttgaagtttatcctgtc
caacgtcatttaaaaaagcatttagctgttttatacgaaagtgaattactttttgatgat
ttcaaactaactatatcttcaaatgatcgttgtataatgactggttcatataataatact
gtgaaagtatttgatcgacaaaatccaattgaaggttcatataaacttattatgcaagat
gaagatatgaatacattccatgatacatttcgtacaactgatgataatacttctgtattt
gtttcacctatatcatcatcaacatcatcacctgacggataa
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