Schistosoma mansoni: Smp_056900
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Entry
Smp_056900 CDS
T01095
Name
(RefSeq) ribonuclease pH related
KO
K12590
exosome complex component RRP46
Organism
smm
Schistosoma mansoni
Pathway
smm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smp_056900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_056900
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Smp_056900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
DUF7414
Motif
Other DBs
NCBI-GeneID:
8345057
NCBI-ProteinID:
XP_018647296
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MTNSTSLFIETNTDCNAIGSATWDFAGHHVVFSIYGPDEAKINDELTHRAYVDVTVTPRT
GQRTSKESELEIYLNHLMERLIDVKEFPRSKFTGRLFIVTGGTNHPRTVAAAINAISLAL
LHLVYHYEQQLHQYVIQSKMLVFAVDVTHPKLYTKKHSSNEPSIFAIYTGQTYSEIDKIN
GSSLHIPIQNFLDIIKLPKSHDDDINSTEHTKNESIYEQALNLLDAMVSQIVSTVHI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattcgacgagcttgtttattgaaacgaatactgactgtaatgctataggatca
gcgacatgggattttgctggacatcatgtagttttttctatatacggcccagatgaagct
aagatcaatgatgaactcactcatcgtgcttatgttgatgtaacagttacacctcgtaca
ggacaacgaacatcaaaggaatcagagctcgaaatttaccttaatcatcttatggaacgt
ctaattgatgtgaaggagttcccacgatctaagtttactggacgcttgtttattgtcact
ggtggtactaatcatcctagaacagtggctgcagccataaacgcaatttcactagctctt
ctccatctggtttaccattacgagcaacaattgcatcagtatgtcatacaatccaaaatg
cttgtatttgcagtggatgtgactcatccaaagctttacactaaaaagcatagttccaat
gagcccagcatttttgctatatacactggtcaaacatattctgaaattgacaaaattaac
ggatcttctctacatatcccgatccaaaactttctggatatcatcaaattaccaaaatca
catgacgatgatataaatagcacagagcataccaaaaatgagagtatttatgaacaagcc
ttaaatttacttgatgcaatggtatcacagattgtttctactgtacatatataa
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integrated database retrieval system
