Schistosoma mansoni: Smp_057120
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Entry
Smp_057120 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_057120
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Smp_057120
Surveillance factors
Other surveillance factors
Smp_057120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
TRI4_N
Motif
Other DBs
NCBI-GeneID:
8345767
NCBI-ProteinID:
XP_018648517
LinkDB
All DBs
Position
1:complement(31814104..31831488)
Genome browser
AA seq
1164 aa
AA seq
DB search
MTAQPESFQFSPQWIRELSDDAFNSRRQSSRSPTEGRVSSKSPSLFSNFVQKHSNCSVPG
DKRKDMVVGKVSKLVWPGDTIYATSVAETDRHVSIVNVKYLCCYFQGQSSREVIKQYSHS
IQFSDSIYGQKSNANQLINPASHCVDTSKQAIQWTQKSSLISPPEPCWQLHSDSGIETSV
NKIPDTINLNTAGHSLPSSSARPLEVQHVGASLLSGNSSVVSNATLNINSILPNDGIPVP
RSDPYSQNNTDSYNNQSKRAVSAYYGINDADKNLDSSVNSNAIWMQQHIWSKSVPQHLHG
FNPTDSTSNSVSSFCGVAATETNRHSSCSVPDADNIHGFFSQLPSFNRLVQPNSNQAYSL
SNSSVQHPPNMQSAEKGFVRRNGSDQSDEHMWLYEDPQGRTQGTFSDAQMNEWLMAGIYF
TPNLRIRRQCDDTFSTLASYTQLFERVPFVSGPRIPPIRGEINQAMLALSTSGFLNKPHF
KNSDNPPTDVLPCNSTNHDQSDGSRVNANMVGNSTVDTSRSLLSEPQHQLYQQLSDFSTS
ACIAATSVAGISVPTCQVTEESLNTTNSKSLSYGFINTSVPVSAPMSLLNNSINNLRIRD
NVEVDFKSVLDNPNNVQQHKPTISSTSTFMNLTSLIPMNPSFPSFNLQFPSRLQGTNGTT
MDDLTSAASSFLSPGFWSVLTQYLNLHPPSANQTSTPMQQLAETAQLAAQLAALVGSHSP
DQTPMQPSQALALAQLLIARGVGLGSINTETPASNGLLTSKKDKPSDNECIANSSIFHTS
EISAVNERRQESQAQWPSLGSTLNQNASHCSEGRFNPVPLNKVSSELSYGKNCGNDSSDN
TSTVSQNHHNCRPNYLDKPQSTPSKPSTSPRPTNVKSKIQPDSTLSEPIQSISSDGYNRT
QQNGRGPKNTEVCSGGSVRSTEQKQTAVSSSRTGSTNQSRVKGSKSNNVRSPTKVVVQNN
SLSSQISSSVNIRPMEAACTPVASNSETDPDQTVEDELKKLTQWCQSRLGSMPMREKVDI
PTVVELLATLDAPYEVERMVQTFLGETARTAQFVKDFLDRRRPFWQLHRKRREQESTIQA
STGQNSSNQPTSTVRSTEKKKRTNPNDTAINNTQRQNSSICNGLSWNKSDSTHLSNVEQI
QDNQWHHIKPKGSHNRKSKKDKSA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacagctcaaccagaatcatttcaattcagtcctcaatggattagggaattatcagat
gatgcatttaactctagaagacagtcgagccgcagtccaaccgaaggtcgcgtttccagc
aaatcccccagcctgttctcaaacttcgtccagaaacattctaattgttctgttcccggg
gataaacgaaaagacatggttgtaggcaaagtctcgaaacttgtgtggccaggtgacacc
atttatgctacttctgtagctgaaacggacaggcacgtttctattgtaaacgtaaaatat
ttatgttgttattttcaaggacaatcttcccgagaggtgatcaaacagtattcacacagc
atacagttttctgactccatatatggccaaaaatcgaatgccaaccaactcatcaatccc
gctagccattgtgttgataccagcaaacaagcaatacagtggactcagaagtcctctttg
atttctccccccgaaccgtgttggcaactccactcggactcaggcattgaaacgtccgtt
aacaaaataccagatacaataaacctgaatacagcaggtcattctttaccttcatcgagt
gcccgacctcttgaagtgcagcatgtaggggcttctctcttatcaggaaattcgtcagtt
gtaagcaacgcaacgttgaatataaattctattttacctaatgatggtatcccagttccc
cgatcagatccatatagtcagaataatactgattcatataataatcagagtaaacgggct
gtcagtgcttattatggaatcaatgatgcagacaagaacttagattccagtgtgaactca
aacgctatatggatgcagcagcatatatggtcaaagtctgttccacagcacttacatggc
tttaaccctactgattccacctccaactccgtgtccagcttctgtggggttgccgctaca
gaaactaatagacattctagctgcagcgttcctgacgccgacaacatacatggtttcttt
tcacaattaccttcatttaatcgacttgtccaaccaaattcaaatcaagcgtattcgttg
tcgaatagcagtgttcaacatcctcctaatatgcagagtgcagagaaaggtttcgttaga
cgtaatggatctgaccagtcggacgagcatatgtggctgtatgaggatccacagggtcgg
acgcaaggtactttcagtgacgctcaaatgaatgaatggcttatggccggaatttacttt
accccaaatcttcgtatacgacgtcaatgtgatgatacattttctactctcgccagttac
acacagctgttcgaacgcgttccgtttgtctctggtcctcgaataccccctattcgtgga
gagatcaatcaagctatgttggctctgtctacatctggtttcttgaataaaccacatttt
aaaaactccgataaccctccaacagatgtgttaccttgtaattcaaccaatcatgatcaa
tcagatggtagtagagtaaatgcaaatatggttggaaattccacagttgacactagtcgt
tcattgttgtcagaaccacagcaccagttgtaccagcaactttcagatttttccacatca
gcttgtatcgctgcaacatctgttgctggaatatcggtacctacttgccaagttactgaa
gagagtttaaatacaacgaattctaaaagtctttcgtatggctttatcaacacgtcagtt
cctgtgagtgcacctatgtccttgttaaataattcaataaataatctgagaattcgggac
aatgtggaagtagattttaaatctgtattagacaaccctaataatgttcaacaacacaaa
ccgaccatttcttcaacctccacgttcatgaacctaacttctttgattccaatgaatcca
tcgttcccatcttttaacttgcagttcccctccagacttcagggcactaatggaactact
atggatgatcttacttcagcagctagttcatttctatctccaggtttttggtccgtttta
acccagtacttaaacttacatcctccatctgcaaatcagacttctactccaatgcagcag
ctcgcagaaacagcacaattggcggctcagctcgcagctttggttggttctcatagtcct
gatcaaactcccatgcaaccttctcaggcgttagctttagcgcaattacttattgctcga
ggagttgggttgggtagtatcaacacagaaacgcctgcttctaatggtttgctcacttct
aagaaggataaaccttctgataacgaatgcattgccaattcatcgatcttccatacttcg
gaaatcagtgctgtaaacgaacgacgtcaagaatctcaggcacaatggccttctcttggt
tctacactaaatcaaaatgcatctcattgtagtgaagggcgattcaatccagtaccgctt
aacaaggtatctagtgagttatcttatgggaaaaactgtgggaacgactcatcagataat
acttctactgtcagtcaaaatcatcataactgtcgtccaaattatttagacaagcctcaa
tctacgccttctaagccgtcgactagtcctcgaccgactaatgttaagtctaaaatacaa
ccagattcaacattatctgaacctatccagtcaatttcttcagatggatataaccgaact
cagcaaaatggccgaggccccaaaaatactgaggtttgttctgggggttctgtgcgcagt
acagagcagaaacagactgcagttagttcatctcgaacagggtcaacaaatcaaagcaga
gttaaggggtctaaatcaaataatgtccgatcacctacaaaggtagtcgttcagaataat
tccttatcatcccaaatatcctctagcgtgaatattcgtcctatggaagcagcttgcacc
ccagttgcatcaaattcggaaacagatcctgaccagacagttgaagatgaactcaaaaag
cttactcagtggtgtcaatcgaggcttggttcaatgccgatgcgtgaaaaggtggatatt
cctactgttgttgagttgttggctacactagatgccccttacgaagttgaacgaatggtc
cagacatttttaggagaaactgctcgtacagctcaatttgtgaaagattttcttgatcgt
cgtcgacctttttggcagttgcataggaaacgacgggaacaagagagtacaatccaagca
tcaacaggtcaaaattcttctaatcaacccacaagtacagttcgatcaactgagaaaaag
aaacgtactaacccgaatgataccgccattaataatacacagcgccagaattcaagcatt
tgcaatgggctgagttggaataaatcagattctactcacttatctaacgttgaacaaatt
caggacaaccagtggcatcacatcaaacctaaaggaagtcataatcgtaaaagcaaaaaa
gataaatctgcgtga
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integrated database retrieval system