Schistosoma mansoni: Smp_058400
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Entry
Smp_058400 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K18735
protein SMG9
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_058400
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
Smp_058400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2393
Motif
Other DBs
NCBI-GeneID:
8352552
NCBI-ProteinID:
XP_018654799
UniProt:
G4VNK6
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Position
W:complement(30858629..30873473)
Genome browser
AA seq
731 aa
AA seq
DB search
MEKEKIKSVIEFFSTSLDEEELIDGESKPDELYTLCDDPMQVPIKLIDEQLRFVDLATVQ
DLFVDNSGFLVVGAIGLQGSGKSSVLNILANCISDGCGVFDAPFSIQTLKDVVANSPCTG
GINLYITQDRVILLDAQPLLSFALTNYHTHLVATGNITSSSSSAHPGLSSLIGPGNWNMD
IWAEMASMQIVAFLINVCHVVLVVSDNLTTASTQLHRLIDRAIGLKPTVFTPNAMPIHTL
RGRQHSDVQKKSSDNTKNCTDIKNLTTSVQGLQISNLNKTNPSIINKDNKSLEVEDVDIS
SLSEQQQFIGNYSTSNNILGQYLHSAEAESKDVSNAINRLINLTDYSASLIHVYNQAPAA
AFLDPVVCEKLDRYRNKILPFMYPEYRRLVSLVTVGPRILSSHLQSRNRDQPTTARQNSA
QNDTRTEINRNTTDVKLTKNSSENRLVTDNFVAQDYSGFLDTQENSVLPTPSGLSEPSSA
SSDKGLASSQKPSNISAETLISVQLDNQSKSNPTHCLTSINTIQEKSKPFPGEKSDGFIP
LDNSNNNGNNCVRKFGLSESEIVSQCCNVLYNVEDELNSILKHTNLSTGVDHHKKIVEKR
SGILPVEGQLLDNDLLHIPGINGEKLNASLVQMYHDVQTTRCNFFDVQKRLDQPRLFLIP
EVDDEGHSPLGCPTYLTSARILQEAVFSTPRQHMMPNFTEKKWITYVHKMWDAVIHSPLL
LDYHSVRMNQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaaaaaataaaaagtgtgatcgaattcttctctacctcactggatgaagaa
gagctaatcgatggggaaagtaaacccgatgaattgtacactctctgtgatgatcctatg
caagtacccatcaaactcatcgatgaacagctaaggttcgtagaccttgcaacagttcaa
gacctttttgttgacaattcaggatttcttgttgttggtgccattggtttacagggttca
ggtaaatcgtctgtgttaaatattttggcgaattgcatttctgacggttgtggagttttt
gatgctcctttcagtattcaaactctcaaagacgtggtggctaacagcccatgtactggt
ggtattaacctatatattacacaagatcgtgtaattcttctggatgctcaacctcttctt
tcattcgcactcaccaactatcacactcacttggttgctactggtaatataacgtcttcg
tcatcgagtgctcatccaggactttcatctcttataggtcctggtaattggaacatggat
atttgggctgaaatggcttctatgcagattgtcgcctttttaataaatgtatgccatgtt
gtacttgttgttagtgataatttaactactgcctcaactcagttacaccggttaatcgat
agagcaataggtcttaaaccaactgtctttacaccgaatgccatgccaatccatacctta
cgtggtcgtcaacattctgatgtacagaaaaagtcatcagataatactaagaattgtaca
gatataaaaaatttgacaactagtgtacaaggtttacaaatttctaatttaaataaaact
aatccatcgattatcaacaaagataataaaagtttggaagttgaagatgttgacatttca
tctttgtctgaacagcaacaatttattgggaattattccacatcaaataacattcttgga
caatatcttcattctgctgaagctgagtctaaagatgtttcaaatgcaattaatcgactg
ataaatttaactgattattcagcatccttaattcatgtatataatcaggctccagcagct
gcatttcttgacccggttgtatgtgaaaaattagataggtatagaaataaaatactacca
tttatgtacccagagtatagaaggttagtatcacttgttactgttggtccaagaatttta
tcctctcaccttcagtcacgaaatcgtgatcagcctacaactgcacgtcaaaactctgca
caaaatgatactcgtactgaaataaatcgaaacactactgacgtaaaactaactaaaaac
agttcagaaaatcgtttagttactgacaattttgtcgcgcaagattattcaggttttctt
gatactcaggaaaattctgtcctacctactccatcaggactttccgaaccgtcatcagct
tcatcagacaaaggacttgcatcatcacaaaagccttcaaatatcagcgcagaaacattg
atttcagtgcaacttgataatcagtcaaaatctaatccaacccactgtttaacttcaata
aatacaattcaagaaaaatcaaagccttttcctggtgaaaaatctgatgggttcattccc
ttggataacagtaacaataatggtaataattgtgttagaaaatttggcttatcggaatca
gagatagtatcgcagtgttgcaatgttttgtacaatgtagaagatgaactcaattctatt
ttaaaacacactaacttatccactggtgttgaccatcacaagaagattgtagaaaaacga
tcgggaatattaccggtcgaaggtcagctgctcgataatgatttattacatatacctggt
attaatggtgaaaagttgaatgctagtcttgttcaaatgtatcatgatgtacaaactacc
aggtgtaactttttcgatgttcaaaagcggttagatcaaccaagattattcttgatacca
gaagttgacgatgaaggacattcaccattagggtgtccaacatacctgacatcagcccgt
attttacaagaagctgttttctctacacctcgacaacatatgatgcctaatttcacggag
aagaaatggataacatatgttcataaaatgtgggatgctgtaatacattctcctttgcta
ctcgattatcattctgttcggatgaatcagatataa
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