Schistosoma mansoni: Smp_059360
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Entry
Smp_059360 CDS
T01095
Name
(RefSeq) pre-mRNA processing factor, putative
KO
K12817
pre-mRNA-splicing factor 18
Organism
smm
Schistosoma mansoni
Pathway
smm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Smp_059360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_059360
Spliceosome [BR:
smm03041
]
Complex C
Other components
Step II factors
Smp_059360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
DUF5487
Motif
Other DBs
NCBI-GeneID:
8353160
NCBI-ProteinID:
XP_018644273
UniProt:
C4QDD1
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MDLVKAEIARQREKLVSSGLCEKKFFKRSLLKQKEEEEYFSKSKRIKEQANNNEDYNFRT
KTEEEDLLLKKFEERSREEREKGKLMPRKEVIRLLRERNQPIRLFGESDYDTFQRLKRVQ
LLEPESKGLRNDLIAALDKLDDAEDEEFYTSGRGKSASESQSVDSSSTSSTLDVKTKENV
LTEDELEKIKIDLARYVTMKEGTATDDATTAVVTISKLAPDIVCTNDFDEGFHDQVIDHT
LRYLKFLLSKWGHALNTRTKEEKLSYSGKMASATYTQTVEYIKPLLRTLQNNRCKDDILN
SLVKIMVLMIDRNYLKANDAYLELAIGNAPWPLGVTNHGIHSRTAQEKIYAKNVAHVLND
ETQRKYIQAIKRLMTQCQKFFPSDPSKSVNYMGTVG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgtcaaagcagaaatagcaaggcaacgtgagaagctagttagcagcggattg
tgtgagaaaaagttctttaagcgttcactattaaaacaaaaggaagaagaggaatatttc
agcaaatccaaacgtatcaaagaacaagcgaataacaatgaagattataattttaggact
aagacagaggaagaggatctcttgttgaaaaagttcgaagaaagaagtcgggaagaaaga
gaaaaagggaagcttatgcctcgtaaagaagttattcgtcttctaagggaacgaaatcaa
cccatacgattatttggtgaaagtgattatgacactttccaacggttgaaaagggtccaa
cttttagaacctgaatcaaaaggattgcgcaatgatctaattgcagcactagataagttg
gatgatgctgaggatgaagagttttacacctcaggtcgtggaaaatcagcttccgaatct
cagtctgttgatagctcatcaacctcctctaccttggatgtaaaaacaaaagaaaatgta
ttaacagaagacgaacttgagaagataaagatagatttagcccgttatgtcaccatgaaa
gagggtactgctactgatgacgcaacgactgcagttgttaccattagtaaacttgcccca
gatattgtatgtaccaatgactttgacgaggggtttcacgatcaagtgatcgaccacacc
cttcgctatctgaagttccttttgtcaaaatggggtcatgctttgaataccaggactaaa
gaagaaaaactatcgtattctggaaaaatggccagtgcaacatatacacaaacagtagag
tatattaaaccactccttcgtacacttcagaataatcgttgcaaagatgatattttgaat
tccttggttaaaatcatggttttgatgattgatcggaactacctaaaggccaatgatgct
tatttagaattagctattggcaatgctccttggccgttaggtgtcacaaatcacggtatt
cactcacgtactgcgcaagaaaaaatctatgccaaaaatgtagcacacgttctgaacgat
gagacacaacgtaaatatattcaagctataaaaagactaatgacacaatgccaaaagttt
ttcccatcagatccttcaaagtctgtcaattacatgggcactgtgggataa
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