KEGG   Schistosoma mansoni: Smp_060170
Entry
Smp_060170        CDS       T01095                                 
Name
(RefSeq) mRNA export protein rae1-related
  KO
K14298  mRNA export factor
Organism
smm  Schistosoma mansoni
Pathway
smm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Smp_060170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_060170
   03036 Chromosome and associated proteins [BR:smm03036]
    Smp_060170
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Smp_060170
Chromosome and associated proteins [BR:smm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Smp_060170
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SPT8 Peptidase_M10_C Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WDCP Beta-prop_HPS5 Tricorn_2nd
Other DBs
NCBI-GeneID: 8340551
NCBI-ProteinID: XP_018655175
UniProt: G4VQN0
LinkDB
Position
W:complement(42311460..42318698)
AA seq 365 aa
MTLFTSGTQNVFNSVNIGANKTMSAAQKTAEVQSPPGDTVSCLRFSPESMQTTFLAATSW
DNRIRIWEVQANGSTIPKAEQMHQGPVFGACWSTDGSKLFSVSADKTAQMWDLGSNTFTQ
VGVHDAPVKTAHFITAPNYSCLMTGSWDKRLRFWDTRQSQPILNLDLPERIYCADVHYPL
ALVGTAGRQIFVYNLENGPTQFSQLESPLKFQSRCISIFMDKQKQNPSGFALGSIEGRVA
IQYLNPTTPKDNFTFKCHRSNAPVNGYHEIFAVNDMAFHPVHGTLATVGSDGCYSFWDKD
ARTKLHSSDSPDQPLTCCVFDPKGQVFCYASGYDWSKGYQFADPSKPIKIMMRLCMEDMT
PGRKS
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgacactctttactagtgggacacaaaatgtctttaattcagttaatatcggcgcaaat
aaaaccatgagtgctgcacaaaaaacggccgaagttcagtctcctccaggggatacagta
tcgtgtcttcgcttcagtcctgagtctatgcaaacgaccttcttggctgctactagttgg
gataatcgtattagaatttgggaagtacaagccaatggttctaccattccaaaagctgaa
cagatgcatcaagggcctgtttttggggcttgctggagcaccgatggttcaaaacttttc
agtgtatcagcagacaaaactgcgcaaatgtgggatcttggttcaaacactttcacgcaa
gttggtgtgcatgatgctcccgtcaaaactgcccattttattactgctccaaattattct
tgtttgatgacaggttcatgggataaaagacttagattctgggatacaagacaatctcag
cctattttaaacttggatttgccggaaaggatctattgtgctgacgttcattatccactt
gctcttgtcgggactgcaggtcggcaaatatttgtgtataatttagaaaacggtcctact
cagttcagccaattagagtctcctcttaaatttcagagtcgttgtatatctatattcatg
gacaaacaaaaacaaaatcccagtggatttgccctaggaagcattgaagggcgtgtcgcc
atacagtatttaaatccaactacgcctaaagataatttcacttttaaatgtcatcgttct
aatgcaccggtcaacggttaccatgaaatttttgcagtaaatgatatggctttccatcca
gtgcatggcacactagccacagtgggatctgatggatgttattcgttttgggataaagat
gctagaactaaattacattcttcggattctccagatcaaccactcacttgctgtgtattt
gatcctaaaggccaagtgttctgttatgcgtcaggttatgattggtctaaaggatatcag
ttcgccgatccatctaaacccatcaaaataatgatgcgcttgtgtatggaagatatgact
cctggtagaaaatcataa

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