Schistosoma mansoni: Smp_063650.3
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Entry
Smp_063650.3 CDS
T01095
Name
(RefSeq) putative transcription initiation factor iib
KO
K03124
transcription initiation factor TFIIB
Organism
smm
Schistosoma mansoni
Pathway
smm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smp_063650.3
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_063650.3
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Smp_063650.3
Prokaryotic type
Archaeal type
TFB
Smp_063650.3
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
8355865
NCBI-ProteinID:
XP_018649262
UniProt:
A0A5K4EGG5
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All DBs
Position
1:54893007..54901340
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AA seq
308 aa
AA seq
DB search
MSHLECKYHPYAVLIEDSHAGDMVCSMCGLVVADRVIDVGSEWRTFSNDANAKDMCRVGA
TENFLLDGGDLSTMISGPSPSDSRQLDEHGKPMYRNRRNISAPDRVLLSAFREISQMGEH
LNLPKSISDHANLLFKQVHETKNLRGRSNDAVSTACLYMACRQEGVPRTFKEVCAVSRVS
KKEIGKVFKKILKILETNVQSVTVEDFMSRFCGNLNLNIAVQRVANVVARRALNLNLVAG
RSPVSVAAAAIYMAAYALGYRKEKREIGDVAGCAEATITCTYRAMHSRASELFPEDVRLA
IRPDELPL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatctagagtgtaagtatcatccatatgcagttcttattgaagattctcatgct
ggggatatggtttgctcgatgtgtggattggttgttgctgatagagtgattgacgttggg
tctgaatggcgcacattttctaatgatgccaacgccaaagatatgtgtcgagtaggagct
actgaaaacttcttgctagatgggggtgatctctcaactatgatcagtggtccatcacct
tctgactcgcgacaacttgatgagcatgggaagccaatgtaccggaaccgtcgcaatatc
tctgcacctgatagggtacttttgagtgcgttcagagaaatcagtcaaatgggtgaacat
ctaaatctccccaaaagcatatctgaccatgctaacttgctgttcaaacaagtccatgag
actaaaaatcttcgaggtcgcagtaatgatgctgtctcaactgcttgcctctacatggcc
tgccgtcaagagggtgtccctcggactttcaaagaagtatgcgctgtgtcacgagtttca
aagaaggaaataggaaaagtttttaaaaagattctaaaaatacttgaaacaaatgtacaa
tcagttacagttgaagacttcatgtctagattctgtggtaatctcaatttgaatattgct
gttcaaagagttgcaaatgtggttgctagaagagctctcaacttaaatttagttgctggt
cgtagcccagtttcggtggcagccgcagccatttacatggcagcttatgcattaggttat
cgtaaagaaaaacgagaaatcggtgatgtggcgggatgtgctgaggctactatcacatgt
acttatcgtgcaatgcactcaagagccagtgaactatttcctgaagatgtcagacttgcc
ataagaccagatgaattaccactatga
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