Schistosoma mansoni: Smp_064020.2
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Entry
Smp_064020.2 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
smm
Schistosoma mansoni
Pathway
smm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smp_064020.2
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_064020.2
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Smp_064020.2
mRNA degradation factors
3'-5' decay
Pan complex
Smp_064020.2
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Motif
Other DBs
NCBI-GeneID:
8355982
NCBI-ProteinID:
XP_018651892
LinkDB
All DBs
Position
4:complement(10228608..10249211)
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AA seq
710 aa
AA seq
DB search
MTSNYVHGGAGIQNSMLSYTLKNLSLGSNQIAQMNDQTNSLCMTPPATQMNFLRPIPGAS
SEAAFPNTHRSASGRTLGIADFLSLNTTPTNRPSVLSTVSISKASLAPQNGHPTRAPERV
ALTSKAVVPGNHGFASMFRPRGPGVSSSRVLSNLPDSRQIPSNSEICSSFFSNRFGGTAS
DGLTTDRISHPTVTHSNSPTSPFDNMLTSTHSFENFLPSSLRQLTQSGQSHIQNSSGPSL
NPCQSDTPLPPEMRPDIHLTPFSDSQCVLPITASQFYSSHQFENTKKLQASGSLKVAPWI
LVPPVPEGTAAHMRTGRVHEAKPNLFNNPSFGPIVIDDDFKHALHSKLQACLFTADESTK
ETVILVYEYIPCSSTLQQIHMSDPLKLTSFTSPFSIGRSVLPHSAIKNAPSDLGMPHESV
MWSYLIQLTSGLRFIHQTFHRSCGILDPTKVLLQDGPRLRINCFGLKDILFYSAQDTNLV
ESQADDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVSGQISGA
DQLMRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEW
SETGDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVII
VTYADIKQWLDTSFSYLVDKHRQSQCELQLTRQRNARQQQQEISNPRSQQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaactacgttcatggtggtgcagggatccagaacagtatgctatcgtacact
ttgaaaaatctgtcactcgggtccaatcaaattgctcagatgaatgaccaaactaactca
ttgtgtatgactccaccagctacgcaaatgaattttcttcgtcctattcctggtgcatct
agtgaggctgctttcccaaacacacatcgttcagcttctggtcgtacgttggggatagca
gatttcctctcactgaatactactccaactaacagaccttctgtattgtccactgtatct
atttcgaaagcatcactcgctccccaaaatggacatccgacgagagctcctgaaagagtg
gctctaacgtcgaaagcagtggttccgggaaaccatggatttgccagcatgttccgtccc
cgaggtcctggtgtttcttcttcccgtgtcctttccaatctaccagatagccggcagatc
ccttcaaactctgagatctgttcatcgttcttctccaaccgatttggcggcacagccagt
gacggtcttacaacggatagaataagtcacccaaccgtcactcactctaactcacctaca
tctccattcgacaatatgttgacctctacacattcgtttgaaaatttcctgccatcaagt
ttaagacaattaacacagtctggacaatctcatatacaaaattcgtcaggtccctcacta
aacccatgtcagtctgatactccactgcctcccgaaatgcgacctgacattcaccttacc
cctttcagtgactcccagtgtgttcttcctattactgcctctcaattctattccagtcat
cagtttgaaaatacaaaaaaactccaggcctctggtagccttaaagtcgccccctggatt
cttgtcccaccagttcctgagggcactgcagctcatatgagaacaggaagagttcatgaa
gctaagccaaacttgttcaacaacccttcatttggtcccatagtaattgatgatgacttc
aagcacgccctgcacagtaaacttcaagcttgcttgttcacggctgatgagtccacaaag
gaaacggttatcttggtttatgaatacataccttgttcatcaactctacaacaaattcat
atgagtgatccattgaaattaactagttttacttcgcctttcagtattggtcgctcagtg
ttaccccatagtgccataaaaaatgctccatctgatctcggaatgccccatgagtctgtt
atgtggtcatatttaatccaattaaccagtggtttgcgttttattcaccagacgtttcac
cgatcatgtggtatactggatcctactaaagtgttattacaagacggaccgcgtttgcga
atcaattgttttggtttaaaggatattctgttctattctgcacaagatactaatttagtg
gaaagtcaggcagatgactttatacaacttggcaaattaatgataggagttgcttgtggt
acagttgcagctgtacaggctagtcaacgagcttcttcattcaatctacttcaacgtgca
tatcgaccagaattagtcactcttattcgaagtttagtatcaggacagatatcaggagca
gatcaactaatgcgagctactgcaccatttgcattcgatcacttaacaaggttatatgat
cactcagatctcttggaaagtcaattattattggaactggaatgtgacagacttttccga
ctcatctgtaaacttcagtctattgtggagcgttgcgatcagggtacttccccagaatgg
tctgaaacaggtgatcgttatatgttgaaattatttcgagatttcgtatttcaccaatcc
gatccccttggtgctccatacttagatcttgcacatattattactacactgaacaaggtc
gaagctgcttcacctgaacgtctttgtctagtcagccgtgatagtcaaaatgtgattatt
gtcacctatgcagatattaaacaatggttagatacaagcttttcttatctagtggataaa
catcgtcagagtcaatgtgaactacaattaacacgtcaacgaaatgctcgccaacaacaa
caggagatctccaatcctagaagtcaacaataa
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