KEGG   Schistosoma mansoni: Smp_064020.2
Entry
Smp_064020.2      CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
smm  Schistosoma mansoni
Pathway
smm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Smp_064020.2
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_064020.2
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Smp_064020.2
  mRNA degradation factors
   3'-5' decay
    Pan complex
     Smp_064020.2
SSDB
Motif
Pfam: Pan3_PK
Other DBs
NCBI-GeneID: 8355982
NCBI-ProteinID: XP_018651892
LinkDB
Position
4:complement(10228608..10249211)
AA seq 710 aa
MTSNYVHGGAGIQNSMLSYTLKNLSLGSNQIAQMNDQTNSLCMTPPATQMNFLRPIPGAS
SEAAFPNTHRSASGRTLGIADFLSLNTTPTNRPSVLSTVSISKASLAPQNGHPTRAPERV
ALTSKAVVPGNHGFASMFRPRGPGVSSSRVLSNLPDSRQIPSNSEICSSFFSNRFGGTAS
DGLTTDRISHPTVTHSNSPTSPFDNMLTSTHSFENFLPSSLRQLTQSGQSHIQNSSGPSL
NPCQSDTPLPPEMRPDIHLTPFSDSQCVLPITASQFYSSHQFENTKKLQASGSLKVAPWI
LVPPVPEGTAAHMRTGRVHEAKPNLFNNPSFGPIVIDDDFKHALHSKLQACLFTADESTK
ETVILVYEYIPCSSTLQQIHMSDPLKLTSFTSPFSIGRSVLPHSAIKNAPSDLGMPHESV
MWSYLIQLTSGLRFIHQTFHRSCGILDPTKVLLQDGPRLRINCFGLKDILFYSAQDTNLV
ESQADDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVSGQISGA
DQLMRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEW
SETGDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVII
VTYADIKQWLDTSFSYLVDKHRQSQCELQLTRQRNARQQQQEISNPRSQQ
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgacgtccaactacgttcatggtggtgcagggatccagaacagtatgctatcgtacact
ttgaaaaatctgtcactcgggtccaatcaaattgctcagatgaatgaccaaactaactca
ttgtgtatgactccaccagctacgcaaatgaattttcttcgtcctattcctggtgcatct
agtgaggctgctttcccaaacacacatcgttcagcttctggtcgtacgttggggatagca
gatttcctctcactgaatactactccaactaacagaccttctgtattgtccactgtatct
atttcgaaagcatcactcgctccccaaaatggacatccgacgagagctcctgaaagagtg
gctctaacgtcgaaagcagtggttccgggaaaccatggatttgccagcatgttccgtccc
cgaggtcctggtgtttcttcttcccgtgtcctttccaatctaccagatagccggcagatc
ccttcaaactctgagatctgttcatcgttcttctccaaccgatttggcggcacagccagt
gacggtcttacaacggatagaataagtcacccaaccgtcactcactctaactcacctaca
tctccattcgacaatatgttgacctctacacattcgtttgaaaatttcctgccatcaagt
ttaagacaattaacacagtctggacaatctcatatacaaaattcgtcaggtccctcacta
aacccatgtcagtctgatactccactgcctcccgaaatgcgacctgacattcaccttacc
cctttcagtgactcccagtgtgttcttcctattactgcctctcaattctattccagtcat
cagtttgaaaatacaaaaaaactccaggcctctggtagccttaaagtcgccccctggatt
cttgtcccaccagttcctgagggcactgcagctcatatgagaacaggaagagttcatgaa
gctaagccaaacttgttcaacaacccttcatttggtcccatagtaattgatgatgacttc
aagcacgccctgcacagtaaacttcaagcttgcttgttcacggctgatgagtccacaaag
gaaacggttatcttggtttatgaatacataccttgttcatcaactctacaacaaattcat
atgagtgatccattgaaattaactagttttacttcgcctttcagtattggtcgctcagtg
ttaccccatagtgccataaaaaatgctccatctgatctcggaatgccccatgagtctgtt
atgtggtcatatttaatccaattaaccagtggtttgcgttttattcaccagacgtttcac
cgatcatgtggtatactggatcctactaaagtgttattacaagacggaccgcgtttgcga
atcaattgttttggtttaaaggatattctgttctattctgcacaagatactaatttagtg
gaaagtcaggcagatgactttatacaacttggcaaattaatgataggagttgcttgtggt
acagttgcagctgtacaggctagtcaacgagcttcttcattcaatctacttcaacgtgca
tatcgaccagaattagtcactcttattcgaagtttagtatcaggacagatatcaggagca
gatcaactaatgcgagctactgcaccatttgcattcgatcacttaacaaggttatatgat
cactcagatctcttggaaagtcaattattattggaactggaatgtgacagacttttccga
ctcatctgtaaacttcagtctattgtggagcgttgcgatcagggtacttccccagaatgg
tctgaaacaggtgatcgttatatgttgaaattatttcgagatttcgtatttcaccaatcc
gatccccttggtgctccatacttagatcttgcacatattattactacactgaacaaggtc
gaagctgcttcacctgaacgtctttgtctagtcagccgtgatagtcaaaatgtgattatt
gtcacctatgcagatattaaacaatggttagatacaagcttttcttatctagtggataaa
catcgtcagagtcaatgtgaactacaattaacacgtcaacgaaatgctcgccaacaacaa
caggagatctccaatcctagaagtcaacaataa

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