Schistosoma mansoni: Smp_066260
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Entry
Smp_066260 CDS
T01095
Name
(RefSeq) putative replication factor C / DNA polymerase III gamma-tau subunit
KO
K10756
replication factor C subunit 3/5
Organism
smm
Schistosoma mansoni
Pathway
smm03030
DNA replication
smm03410
Base excision repair
smm03420
Nucleotide excision repair
smm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smp_066260
03410 Base excision repair
Smp_066260
03420 Nucleotide excision repair
Smp_066260
03430 Mismatch repair
Smp_066260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smm03032
]
Smp_066260
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_066260
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_066260
DNA replication proteins [BR:
smm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Smp_066260
DNA Replication Termination Factors
ELG1-RFC complex
Smp_066260
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Smp_066260
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Smp_066260
Check point factors
HRAD17(Rad24)-RFC complex
Smp_066260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
ResIII
AAA_11
TniB
AAA_14
AAA_5
AAA_16
DEAD
AAA_24
AAA_assoc_2
AAA_7
AAA_30
AAA_19
ATPase_2
RuvB_N
DUF815
Mg_chelatase
AAA_18
bpMoxR
DNA_pol3_delta
Viral_helicase1
Rad17
Motif
Other DBs
NCBI-GeneID:
8343167
NCBI-ProteinID:
XP_018650628
LinkDB
All DBs
Position
2:32737647..32752346
Genome browser
AA seq
325 aa
AA seq
DB search
MIYEAKGCIFAGLNVFVQAKFILTKLYDLKRFIDNDRLPHLLFYGPPGTGKTSTILAAAK
RLYSRQFSSMVLELNASDDRGIDVVREQVLSFASTKTLFAGKFKLVILDEADSMTKDAQN
ALRRIIEKFTENTRFCLICNYLSKIIPAIQSRCTKFRFAPLAFNDVSTCLRKIASNEGVD
LTDDGVKAIYQFASGDMRKSINLLQSTYMSSKTVDGPSVYACVAYPSPAEVRSLLDHVLN
EPISTAYHNITAVKNLKGIALQDIITEIHPLIMRIDLPDKIRCDLLIALSDIENRMSQGA
SERLQLGAFVSAFTRAKIALESKIS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgaggcaaaaggatgcattttcgctggtttaaatgtatttgtacaagcaaaa
tttattctaaccaaattatatgatttaaagagatttattgataatgacaggcttccacat
ttgttgttttatggtccaccgggaacgggaaaaactagcactatcctagctgctgcaaag
cgtctttactctcgtcagttttcatccatggttttggagcttaatgcctccgacgatcgc
gggattgatgtagttcgtgaacaagtactgagttttgccagcacgaaaactctcttcgct
gggaaattcaagctagttattttagacgaagctgattccatgacaaaagacgctcaaaat
gcacttcgaagaatcatcgaaaaatttacggaaaataccagattttgtttgatctgtaac
tacttgtcgaaaatcatccctgcaattcaatcacggtgcaccaagttccgtttcgcacca
ctggcattcaatgatgtcagtacgtgtcttcgaaaaattgcatcaaacgagggcgtcgat
ttaacagacgatggggtaaaggcaatttatcagtttgcatctggggatatgcgtaaatct
atcaacttattgcagagtacatatatgtcttcaaaaactgtcgacggaccttctgtatat
gcttgtgttgcatatccttcaccggctgaggttcgatcgctattggatcatgtactgaat
gaaccgatcagtactgcctatcataatattacagcagtaaaaaatctaaaaggaatcgca
ctacaagatataattacggaaattcatccattgataatgcgtattgatttgccggataaa
atacgttgtgatttattaattgcgttatctgatatagaaaatcgtatgtcacaaggagca
tcagaaagattacaattgggtgcatttgtttcagcatttactcgagcgaaaatagcacta
gagtccaagatttcctaa
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