Schistosoma mansoni: Smp_068950
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Entry
Smp_068950 CDS
T01095
Name
(RefSeq) putative retinoblastoma-binding protein 4 (rbbp4)
KO
K10752
histone-binding protein RBBP4
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
smm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_068950
03083 Polycomb repressive complex
Smp_068950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_068950
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Smp_068950
Histone modification proteins
HAT complexes
HATB complex
Smp_068950
HDAC complexes
Sin3A-HDAC complex
Smp_068950
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Smp_068950
PRC2.2
Smp_068950
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Smp_068950
Heterochromatin formation proteins
Other heterochromatin formation proteins
Smp_068950
Chromatin remodeling factors
NuRD complex
Smp_068950
NuRF complex
Smp_068950
NuRF complex (fruit fly)
Smp_068950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
8354289
NCBI-ProteinID:
XP_018654026
LinkDB
All DBs
Position
W:10161924..10168865
Genome browser
AA seq
424 aa
AA seq
DB search
MMLHPSDSEDIVEERVINEEYKIWKRNTPFLYDMLMSHCLEWPSLTAQWLPSVERTGRDY
SVHRLILGTHTSDEQNHLLIVTVHLPNDQAEFDASAYDSERGDFGGFYFPSGKLEISMKI
NHEGEVNRARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGY
GLSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDAMAIFMGHHSVVEDVSWHLFHGH
IFGSVADDNKLMVWDTRSSNRTKPQHQVDAHTAEVNCLAFNPFSEFIIATGSADKTVALW
DLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGIDQTAEDADD
GPPELLFIHAGHTAKISDFSWNINDPWAICSVSEDNILQIWQMAENIYNDDEIEMGNPEL
EQHS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcatccttcggattctgaagacattgtcgaagagagagtaataaacgaagaa
tacaagatatggaagaggaatactccgttcttgtacgatatgctgatgtcacactgcttg
gaatggccaagtttaactgcccaatggttgccatctgtggaaaggactgggcgagattac
tccgttcatcgtttaatactcgggactcacacatctgatgagcaaaatcacttgttgata
gttacggttcatctaccaaatgaccaggcggagtttgatgcaagtgcttatgatagtgaa
cgaggtgatttcgggggattttattttccatctgggaagttggaaatatcaatgaaaata
aatcatgaaggcgaagtcaatcgtgctaggtttatgccacagaacccagacataatagct
accaaaacaccaagtggtgatgttttaatattcaattatccaagacatccaccgaaaacc
ccatcagaccgtggttgccaacctgatctacgtctcaagggtcatcaaaaagaaggttat
ggtctttcatggaatgtgtctcttaatggtcatcttctttcagcgtctgatgatcagaca
atttgtttatgggatgttaatgctgctcctttagatggctgtgatctagatgcgatggct
atctttatgggtcatcattcagtagttgaggacgtttcctggcaccttttccatggacat
atttttggttcagtagcagatgataataaacttatggtttgggatacacggagttcaaat
cgtacaaaacctcagcaccaagtggatgctcatacagccgaagtcaattgtcttgctttt
aatccattttctgagtttattattgcgacaggaagtgcggacaaaactgttgctctttgg
gatctgcgtaatcttcgactgaagctacattcatttgaatctcatcgagacgaaatattc
caggttcagtggtctccacataatgaaactatattggcaagctcagggactgatcgtcgt
cttcatgtctgggatttgagtaaaataggtattgatcagactgccgaagatgcagatgat
ggacctcctgagttattgttcattcatgctgggcatacagcaaagatttcagatttctcg
tggaatattaatgatccttgggctatttgctctgtatccgaggataatattttacagatc
tggcaaatggctgagaatatatacaatgatgatgaaatagagatggggaatccagaactt
gaacagcattcttag
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integrated database retrieval system
