Schistosoma mansoni: Smp_071470
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Entry
Smp_071470 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K09445
interferon regulatory factor 4
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_071470
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
Smp_071470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
MH2
Motif
Other DBs
NCBI-GeneID:
8348804
NCBI-ProteinID:
XP_018648192
UniProt:
G4V9K3
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All DBs
Position
1:23033031..23043480
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AA seq
638 aa
AA seq
DB search
MDIRVRLRPWLESRLNDGWIEGLKWIDREKGIFRIPWKHHSKHTWTEDDAAIFKDWAVVT
GRYREGIDTPDWPMWKTRLRCALNKAPDIQEVKQRHNLHCEEPFKVYRFVSKTESLWRAN
AIRNASMIFDGIQAGCRFTSWSGMNSASSPVNSPIPLSRRPTLIVQKLSGLKSNSHRFAL
IRRGDGVQHIQSNYRPAYLLQGHQLNRHRIYHNSTSTNANQRLGCDNDSMNLDSYASLSP
STYTEYQAPNNTTVITGGISLPNRFVPGSGSANQHVQLLPDIMEPEYHQLGVRIQHLSVR
IRDTIVTNPNGCCIYYGRFDEISSPAAPDPIEAQIPHQISVANKAYVDLLLDNMVRGIIL
TVIHGSIYAERICKCAVFVYIPTVGGEYILAKKLGRRLREKIFDYDQFLFHLDSYRQNQQ
SCPHFEVVLAFGQQLKPGISTDSLLVWARVASCRAWFQLHKAHTLRPGYGECNNVQLNNP
VCPSIYYHISENSEQSECVINRFSVSQSLNGCSSYNENPAILKTEDDSVNEHIVPTINFT
DSLDPDSIVTEQIIEEGVEVPLDDTDDLAYSTSGSVLQENLIVCVASQDVGSVPMCTSSS
SVTQDVFLSGINPINMKSQPLLNPHEEIAEKYNSRPEN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtgtcaggcttcggccttggttggaaagtcgacttaacgacggatggatc
gaaggactaaagtggatcgacagagaaaagggaatatttaggattccctggaagcatcat
agtaagcatacatggacggaagatgatgctgccatatttaaggactgggctgttgttact
gggcgttatcgagagggtatcgatacacctgactggccgatgtggaaaactcggcttcgt
tgtgcgctgaacaaagctcctgatatccaagaggtcaagcagcgtcacaacttacactgt
gaagaaccttttaaagtgtatcgctttgttagcaaaacagaatctctatggcgagcgaat
gcaataagaaatgctagtatgattttcgatggtatacaggcagggtgtagattcacttcg
tggagtggaatgaactctgctagctccccagtgaattctccaattccactctcaagacga
cctacgctgattgtccagaagttgtcaggactcaagtcaaattcccatcggttcgctctg
atccgaaggggtgatggtgttcaacatatccagtccaattatcgccctgcttatttactc
caaggtcaccagcttaaccgtcacaggatttatcacaattctactagcacgaatgctaat
caaagactgggatgcgataatgatagcatgaacttagatagttatgccagcctatcccca
tcaacttacactgagtatcaagctccaaacaacactacagttataactggcggcatatct
cttcctaaccgttttgtccctgggagtggttcagcaaatcaacatgttcagttgttacct
gacattatggaaccagaataccatcagttaggtgtgcgcatccaacatctaagtgtccgc
attagagacacaatagttaccaatcctaatggctgttgtatttactatggaagatttgat
gagatcagttcacctgctgctcctgatcctattgaagcacaaattccacaccaaatctca
gtagccaacaaggcctatgttgatctcttgttggataatatggtcaggggaatcatactg
acggttatccatggtagtatatacgctgaaagaatatgcaagtgtgctgtttttgtgtat
attcctacggtgggtggagaatatattttggcaaagaagcttggacgtcggttacgggag
aaaatattcgactatgatcagtttttgtttcatctggactcatatcgtcaaaatcaacag
tcatgtcctcatttcgaagtcgttctggcatttggtcaacaactgaagcctggaatatct
actgatagccttttggtatgggctcgtgttgctagttgtcgtgcttggttccagttacac
aaagctcatacactcagaccaggttatggtgagtgtaacaatgtacaattaaataatcca
gtatgtccttccatctactatcatattagtgaaaactcagaacagtcagagtgtgttata
aaccgtttttccgttagtcagagtttgaatggatgcagtagttacaatgaaaatccagct
attttaaaaacggaagatgattctgtcaatgaacacattgttcctacgattaattttaca
gactccctagatcctgatagtattgttactgaacagataattgaagagggagttgaagtc
cctttggatgatactgatgatttggcgtatagcacttccggttctgtattgcaggagaat
ctcatagtttgtgtagcatctcaagatgttggttcagtgcctatgtgtacttcaagttct
tcagtcacccaagatgtgttcctgagtggtattaatccaatcaacatgaagtcccaacca
ctactgaatccacatgaagagatcgcagaaaaatataactcgcgacctgaaaactga
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